RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 NCEH1Q6PIU2 408 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 DSG4Q86SJ6 1040 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 DCAF4L2Q8NA75 395 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 C3orf20Q8ND61 904 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 SNX19Q92543 992 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 AGPAT1Q99943 283 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 RAB6CQ9H0N0 254 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 MUC3BQ9H195 1237 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 OSBPL2Q9H1P3 480 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 RETREG1Q9H6L5 497 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 VPS51Q9UID3 782 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 PPM1HQ9ULR3 514 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 TPX2Q9ULW0 747 aaKnown RBP19.89■□□□□ 0.77
USP40-207ENST00000450940 CABIN1Q9Y6J0 2220 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 TP53BP1Q12888 1972 aaPredicted RBP19.88■□□□□ 0.77
USP40-207ENST00000450940 EPG5Q9HCE0 2579 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 A0A1B0GVT2 93 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 A0A1W2PPC4 97 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 TCRBV5S1A1TA0A578 114 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 SMTNL1A8MU46 457 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 TEX33O43247 280 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 CER1O95813 267 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 MT-CO1P00395 513 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 IL1BP01584 269 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 CALB1P05937 261 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 KRT3P12035 628 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 SRCP12931 536 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 RFC1P35251 1148 aaPredicted RBP19.88■□□□□ 0.77
USP40-207ENST00000450940 TEAD4Q15561 434 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 C15orf59Q2T9L4 293 aaPredicted RBP19.88■□□□□ 0.77
USP40-207ENST00000450940 HLA-BQ31612 363 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 ACCSLQ4AC99 568 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 MANEALQ5VSG8 457 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 LRSAM1Q6UWE0 723 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 DBX2Q6ZNG2 339 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 MON1BQ7L1V2 547 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 IRF2BP2Q7Z5L9 587 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 PHLDB2Q86SQ0 1253 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 OR8D1Q8WZ84 308 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 SYT11Q9BT88 431 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 ZYG11BQ9C0D3 744 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 KDM4CQ9H3R0 1056 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 GAREM1Q9H706 876 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 SARDHQ9UL12 918 aa19.88■□□□□ 0.77
USP40-207ENST00000450940 A0A0D9SEW6 157 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 SIGLEC16A6NMB1 481 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 SLC7A4O43246 635 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 SNAP91O60641 907 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 SRGAP2O75044 1071 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 CCDC172P0C7W6 258 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 FERP16591 822 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 OR1E1P30953 314 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 CLCN6P51797 869 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 ADPRHP54922 357 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 C1QBPQ07021 282 aaKnown RBP19.87■□□□□ 0.77
USP40-207ENST00000450940 ARL13BQ3SXY8 428 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 FAM46CQ5VWP2 391 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 WDR59Q6PJI9 974 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 Q6ZVU0 165 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 TFAP2DQ7Z6R9 452 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 BAP1Q92560 729 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 FUCA2Q9BTY2 467 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 EBF2Q9HAK2 575 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 IL21RQ9HBE5 538 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 OR12D3Q9UGF7 316 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 ANKRD6Q9Y2G4 727 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 PCDHGB2Q9Y5G2 931 aa19.87■□□□□ 0.77
USP40-207ENST00000450940 CXorf51AA0A1B0GTR3 108 aa19.86■□□□□ 0.77
USP40-207ENST00000450940 FAM47DPA6NHR8 397 aa19.86■□□□□ 0.77
USP40-207ENST00000450940 SH3BP5O60239 455 aa19.86■□□□□ 0.77
USP40-207ENST00000450940 ZMPSTE24O75844 475 aa19.86■□□□□ 0.77
USP40-207ENST00000450940 GJB6O95452 261 aa19.86■□□□□ 0.77
USP40-207ENST00000450940 METAP1P53582 386 aa19.86■□□□□ 0.77
USP40-207ENST00000450940 HDAC4P56524 1084 aa19.86■□□□□ 0.77
USP40-207ENST00000450940 RACK1P63244 317 aaKnown RBP19.86■□□□□ 0.77
USP40-207ENST00000450940 CDO1Q16878 200 aa19.86■□□□□ 0.77
USP40-207ENST00000450940 KIF19Q2TAC6 998 aa19.86■□□□□ 0.77
USP40-207ENST00000450940 CAVIN1Q6NZI2 390 aaKnown RBP19.86■□□□□ 0.77
USP40-207ENST00000450940 OR2A12Q8NGT7 310 aa19.86■□□□□ 0.77
USP40-207ENST00000450940 NTAN1Q96AB6 310 aa19.86■□□□□ 0.77
USP40-207ENST00000450940 FNDC3AQ9Y2H6 1198 aaKnown RBP19.86■□□□□ 0.77
USP40-207ENST00000450940 MAP1BP46821 2468 aaKnown RBP19.85■□□□□ 0.77
USP40-207ENST00000450940 DOCK9Q9BZ29 2069 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 KMT2BQ9UMN6 2715 aaPredicted RBP19.85■□□□□ 0.77
USP40-207ENST00000450940 SPAARA0A1B0GVQ0 90 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 K7ERQ8 282 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 VILLO15195 856 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 SMAD6O43541 496 aaKnown RBP19.85■□□□□ 0.77
USP40-207ENST00000450940 LATO43561 262 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 CBFA2T3O75081 653 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 CTSKP43235 329 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 ZNF165P49910 485 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 FAM193AP78312 1265 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 SIM1P81133 766 aaPredicted RBP19.85■□□□□ 0.77
USP40-207ENST00000450940 SLC20A2Q08357 652 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 IQCB1Q15051 598 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 PPP1R15BQ5SWA1 713 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 ACAD10Q6JQN1 1059 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.85■□□□□ 0.77
USP40-207ENST00000450940 NAXDQ8IW45 347 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms