RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 RNF219Q5W0B1 726 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 GTF2IRD2BQ6EKJ0 949 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF783Q6ZMS7 281 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 LHFPL2Q6ZUX7 228 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 PTCHD4Q6ZW05 846 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 CHST15Q7LFX5 561 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 GTF2IRD2Q86UP8 949 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 FAM160B2Q86V87 743 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 RHPN2Q8IUC4 686 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 TMTC1Q8IUR5 882 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 CEP97Q8IW35 865 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 KBTBD2Q8IY47 623 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 EFHBQ8N7U6 833 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 BVESQ8NE79 360 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 CLHC1Q8NHS4 586 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 ANGPTL6Q8NI99 470 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 ETNPPLQ8TBG4 499 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 TSPEARQ8WU66 669 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 WDR60Q8WVS4 1066 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 REXO5Q96IC2 774 aaKnown RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 MRGPRX3Q96LB0 322 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 TSNARE1Q96NA8 513 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 DHRS9Q9BPW9 319 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 CRNKL1Q9BZJ0 848 aaKnown RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 KRT23Q9C075 422 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 PUS7LQ9H0K6 701 aaKnown RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 TMEM168Q9H0V1 697 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 OR10A4Q9H209 315 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 GHITMQ9H3K2 345 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 THAP9Q9H5L6 903 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 SPACA1Q9HBV2 294 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 CYP26B1Q9NR63 512 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 VPS45Q9NRW7 570 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 MRPL39Q9NYK5 338 aaKnown RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 EURLQ9NYK6 297 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 WWOXQ9NZC7 414 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 KLHL9Q9P2J3 617 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 TBC1D29Q9UFV1 150 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 FBXL7Q9UJT9 491 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 STK38LQ9Y2H1 464 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 TIMM13Q9Y5L4 95 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 ATP8B3O60423 1300 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF518AQ6AHZ1 1483 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 KDM5CP41229 1560 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 NEURL4Q96JN8 1562 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 DIP2CQ9Y2E4 1556 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ST20-MTHFSA0A0A6YYL1 179 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 FAM237AA0A1B0GTK4 181 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 PGPEP1LA6NFU8 196 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 A6NLC8 198 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 SYCE1LA8MT33 242 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 FAM47E-STBD1D6RA91 191 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 IRAK2O43187 625 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 GPR39O43194 453 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 GATCO43716 136 aaKnown RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 STX10O60499 249 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF623O75123 536 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 PEX11AO75192 247 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 SUPT3HO75486 399 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 RFPL3O75679 317 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CBR3O75828 277 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ATP5HO75947 161 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 SGPL1O95470 568 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 LRG1P02750 347 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 OPN1LWP04000 364 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CLTAP09496 248 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CLTBP09497 229 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CPA3P15088 417 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 HOXB8P17481 243 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CASTP20810 708 aaKnown RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 GALP22466 123 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 GLRA2P23416 452 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 MC4RP32245 332 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CCR1P32246 355 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 IL6STP40189 918 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 SLC26A3P40879 764 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 BCL6P41182 706 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 STAT5BP51692 787 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 USP14P54578 494 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ADARP55265 1226 aaKnown RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 HUNKP57058 714 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 RPL11P62913 178 aaKnown RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 RBP5P82980 135 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ACTN3Q08043 901 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 C17orf67Q0P5P2 114 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 BFSP1Q12934 665 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 RIPK1Q13546 671 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 BLMHQ13867 455 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 BMPR2Q13873 1038 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 DDR2Q16832 855 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ABCB5Q2M3G0 1257 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 TTMPQ5BVD1 217 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 C1orf185Q5T7R7 199 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 SYDE2Q5VT97 1194 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 DAB2IPQ5VWQ8 1189 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 VHLLQ6RSH7 139 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ANO5Q75V66 913 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 BZW1Q7L1Q6 419 aaKnown RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 LRRC6Q86X45 466 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ERICH1Q86X53 443 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms