RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 PDPK2PQ6A1A2 396 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 MSANTD2Q6P1R3 559 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 ARHGAP36Q6ZRI8 547 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 ZCCHC23Q6ZST2 131 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 OTOP3Q7RTS5 596 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 SCD5Q86SK9 330 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 ZNF280BQ86YH2 543 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 WDR75Q8IWA0 830 aaKnown RBP10.63□□□□□ -0.71
CPNE1-218ENST00000439806 ARHGAP12Q8IWW6 846 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 COLGALT2Q8IYK4 626 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.63□□□□□ -0.71
CPNE1-218ENST00000439806 RTL3Q8N8U3 475 aaKnown RBP10.63□□□□□ -0.71
CPNE1-218ENST00000439806 IPMKQ8NFU5 416 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 AGAP11Q8TF27 550 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 ATXN7L3BQ96GX2 97 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 FUBP3Q96I24 572 aaKnown RBP eCLIP10.63□□□□□ -0.71
CPNE1-218ENST00000439806 HHIPL1Q96JK4 782 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 C8orf48Q96LL4 319 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 RILPQ96NA2 401 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 IL12RB2Q99665 862 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 SIKE1Q9BRV8 207 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 TBC1D10AQ9BXI6 508 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 NMUR1Q9HB89 426 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 FBXO6Q9NRD1 293 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-218ENST00000439806 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.63□□□□□ -0.719e-7■□□□□ 11
CPNE1-218ENST00000439806 MARCOQ9UEW3 520 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-218ENST00000439806 NUDT5Q9UKK9 219 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 EMCNQ9ULC0 261 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 SCML2Q9UQR0 700 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 DNAJC16Q9Y2G8 782 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 DOCK4Q8N1I0 1966 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 SYN3O14994 580 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 MATN3O15232 486 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 CACNG3O60359 315 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 FGF3P11487 239 aaPredicted RBP10.62□□□□□ -0.71
CPNE1-218ENST00000439806 CPA3P15088 417 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 GRK2P25098 689 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 NMBRP28336 390 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 HADHAP40939 763 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 MAGEA12P43365 314 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 CDK7P50613 346 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 AQP5P55064 265 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 TBX4P57082 545 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 NRG1Q02297 640 aaPredicted RBP10.62□□□□□ -0.71
CPNE1-218ENST00000439806 EIF4EBP2Q13542 120 aaPredicted RBP10.62□□□□□ -0.71
CPNE1-218ENST00000439806 PCLAFQ15004 111 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 CTC1Q2NKJ3 1217 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 CTXN3Q4LDR2 81 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 HSP90AA5PQ58FG0 334 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 WASHC2DQ5SRD0 308 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 SDHAF4Q5VUM1 108 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 MBLAC2Q68D91 279 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 ZNF280DQ6N043 979 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 CMC1Q7Z7K0 106 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 RTN4RL1Q86UN2 441 aaPredicted RBP10.62□□□□□ -0.71
CPNE1-218ENST00000439806 ALYREFQ86V81 257 aaKnown RBP10.62□□□□□ -0.71
CPNE1-218ENST00000439806 MON1AQ86VX9 555 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 LRRC49Q8IUZ0 686 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 KLHDC8BQ8IXV7 354 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 ABI1Q8IZP0 508 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 CNTD1Q8N815 330 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 ATP6V0D2Q8N8Y2 350 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 RAET1EQ8TD07 263 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 LINC01599Q8WXQ3 324 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 UTP4Q969X6 686 aaKnown RBP10.62□□□□□ -0.71
CPNE1-218ENST00000439806 ISL2Q96A47 359 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 MFSD3Q96ES6 412 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 PTCD3Q96EY7 689 aaKnown RBP10.62□□□□□ -0.71
CPNE1-218ENST00000439806 PGLYRP2Q96PD5 576 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 BTBD10Q9BSF8 475 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 TSEN34Q9BSV6 310 aaKnown RBP10.62□□□□□ -0.71
CPNE1-218ENST00000439806 KIFC1Q9BW19 673 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 FTHL17Q9BXU8 183 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 TRPV6Q9H1D0 765 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 TBC1D13Q9NVG8 400 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 NOP53Q9NZM5 478 aaKnown RBP10.62□□□□□ -0.71
CPNE1-218ENST00000439806 TMEM216Q9P0N5 145 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 FNIP2Q9P278 1114 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 SRRDQ9UH36 339 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 RPL26L1Q9UNX3 145 aaKnown RBP10.62□□□□□ -0.71
CPNE1-218ENST00000439806 NEU3Q9UQ49 428 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 TLR6Q9Y2C9 796 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 ANKRD6Q9Y2G4 727 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 HS3ST4Q9Y661 456 aa10.62□□□□□ -0.71
CPNE1-218ENST00000439806 GREB1Q4ZG55 1949 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 A0A096LPK6 155 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 E2F8A0AVK6 867 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 CCDC78A2IDD5 438 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 OR6C75A6NL08 312 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 WASH4PA8MWX3 477 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 GYG2O15488 501 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 B4GALT3O60512 393 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 MAFKO60675 156 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 LYPLA1O75608 230 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-218ENST00000439806 OAZ2O95190 189 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 HLA-DQB2P05538 268 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 APOA4P06727 396 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 RALBP11234 206 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 PAMP19021 973 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 KCNA4P22459 653 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms