RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GJD4Q96KN9 370 aaPredicted RBP14.96□□□□□ -0.01
CCDC50-201ENST00000392455 CPSF4O95639 269 aaKnown RBP14.96□□□□□ -0.02
CCDC50-201ENST00000392455 SRGNP10124 158 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 ZNF7P17097 686 aaPredicted RBP14.96□□□□□ -0.02
CCDC50-201ENST00000392455 PAPD7Q5XG87 772 aaKnown RBP14.96□□□□□ -0.02
CCDC50-201ENST00000392455 FAM126BQ8IXS8 530 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 C9orf72Q96LT7 481 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 CCSER1Q9C0I3 900 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 TAS2R13Q9NYV9 303 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 ZNF70Q9UC06 446 aaPredicted RBP14.96□□□□□ -0.02
CCDC50-201ENST00000392455 INVSQ9Y283 1065 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 SPEF1Q9Y4P9 236 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 A2ML1A8K2U0 1454 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 AVILO75366 819 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 LSM8O95777 96 aaKnown RBP14.96□□□□□ -0.02
CCDC50-201ENST00000392455 CYP17A1P05093 508 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 THRBP10828 461 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 PPIBP23284 216 aaKnown RBP14.96□□□□□ -0.02
CCDC50-201ENST00000392455 RPL22P35268 128 aaKnown RBP14.96□□□□□ -0.02
CCDC50-201ENST00000392455 CCR3P51677 355 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 DDX39BQ13838 428 aaKnown RBP14.96□□□□□ -0.02
CCDC50-201ENST00000392455 CYP2A13Q16696 494 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 FAM71DQ8N9W8 422 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 CAPSLQ8WWF8 208 aa14.96□□□□□ -0.02
CCDC50-201ENST00000392455 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.96□□□□□ -0.02
CCDC50-201ENST00000392455 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 MYMKA6NI61 221 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 SERPINF2P08697 491 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 VPS26BQ4G0F5 336 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 LYPLAL1Q5VWZ2 237 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 TCAIMQ8N3R3 496 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 SH2D3CQ8N5H7 860 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 ERMAPQ96PL5 475 aaPredicted RBP14.95□□□□□ -0.02
CCDC50-201ENST00000392455 ZNF607Q96SK3 696 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 SNX6Q9UNH7 406 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 NPTX2P47972 431 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 TNK2Q07912 1038 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 CDC42EP5Q6NZY7 148 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 KYAT3Q6YP21 454 aaKnown RBP14.95□□□□□ -0.02
CCDC50-201ENST00000392455 PTCD2Q8WV60 388 aaKnown RBP14.95□□□□□ -0.02
CCDC50-201ENST00000392455 MED8Q96G25 268 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 TRIM38O00635 465 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 ME2P23368 584 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 FMR1Q06787 632 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCDC50-201ENST00000392455 LACTB2Q53H82 288 aaPredicted RBP14.95□□□□□ -0.02
CCDC50-201ENST00000392455 ALDH8A1Q9H2A2 487 aaPredicted RBP14.95□□□□□ -0.02
CCDC50-201ENST00000392455 UBQLN1Q9UMX0 589 aaKnown RBP14.95□□□□□ -0.02
CCDC50-201ENST00000392455 ADSSP30520 456 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 SDC2P34741 201 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 NR1D2Q14995 579 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 SMU1Q2TAY7 513 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 ANKRD26P1Q6NSI1 321 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 ACE2Q9BYF1 805 aaPredicted RBP14.95□□□□□ -0.02
CCDC50-201ENST00000392455 ITGB3P05106 788 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 GSTT2BP0CG30 244 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 HOXC12P31275 282 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 IRAK1P51617 712 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 CACNA2D1P54289 1103 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 RAB15P59190 212 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 EMC1Q8N766 993 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 PLGRKTQ9HBL7 147 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 MED11Q9P086 117 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 PCDH10Q9P2E7 1040 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 COX7A2P14406 83 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 SSTP61278 116 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 AGKQ53H12 422 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 GPRC5AQ8NFJ5 357 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 TMEM169Q96HH4 297 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 SCGB3A2Q96PL1 93 aa14.95□□□□□ -0.02
CCDC50-201ENST00000392455 FAM205CA6NFA0 338 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 CYP7B1O75881 506 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 PDHBP11177 359 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 SLC25A25Q6KCM7 469 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 FAM171BQ6P995 826 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 C16orf86Q6ZW13 317 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 ARMCX6Q7L4S7 300 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 NKX2-3Q8TAU0 364 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 FIG4Q92562 907 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 TMEM253P0C7T8 217 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 MECP2P51608 486 aaKnown RBP14.94□□□□□ -0.02
CCDC50-201ENST00000392455 FNDC5Q8NAU1 212 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 PTCD3Q96EY7 689 aaKnown RBP14.94□□□□□ -0.02
CCDC50-201ENST00000392455 KLHL32Q96NJ5 620 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 FBXO44Q9H4M3 255 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 LOC100506127A0A0U1RQW1 187 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 ZCCHC18P0CG32 403 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 COMTP21964 271 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 MAPK7Q13164 816 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 SPANXN3Q5MJ09 141 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 DDI2Q5TDH0 399 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 TMPRSS11AQ6ZMR5 421 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 PTF1AQ7RTS3 328 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 SPATA9Q9BWV2 254 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 MOV10Q9HCE1 1003 aaKnown RBP14.94□□□□□ -0.02
CCDC50-201ENST00000392455 SERPINB7O75635 380 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 TFRCP02786 760 aaKnown RBP14.94□□□□□ -0.02
CCDC50-201ENST00000392455 MCL1Q07820 350 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 CPNE1Q99829 537 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 MXRA8Q9BRK3 442 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 SLC35C2Q9NQQ7 365 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms