RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 TMEM59LQ9UK28 342 aa14.61□□□□□ -0.07
NELFE-201ENST00000375425 PPM1HQ9ULR3 514 aa14.61□□□□□ -0.07
NELFE-201ENST00000375425 CELSR3Q9NYQ7 3312 aa14.61□□□□□ -0.07
NELFE-201ENST00000375425 CABIN1Q9Y6J0 2220 aa14.61□□□□□ -0.07
NELFE-201ENST00000375425 TMEM8BA6NDV4 472 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 MCF2LO15068 1137 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 BNIP3LO60238 219 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 DFNA5O60443 496 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 SRGAP2O75044 1071 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 GFPT2O94808 682 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 WNT1P04628 370 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 RHOCP08134 193 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 CD38P28907 300 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 ANP32AP39687 249 aaKnown RBP14.6□□□□□ -0.07
NELFE-201ENST00000375425 CCT8P50990 548 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 POLR2FP61218 127 aaKnown RBP14.6□□□□□ -0.07
NELFE-201ENST00000375425 NOMO3P69849 1222 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 KRT83P78385 493 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 IL9RQ01113 521 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 KRT31Q15323 416 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 POM121L1PQ3SYA9 428 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 CDKAL1Q5VV42 579 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 NAA35Q5VZE5 725 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 TRNP1Q6NT89 227 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 Q6ZVU0 165 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 SETD3Q86TU7 594 aaPredicted RBP14.6□□□□□ -0.07
NELFE-201ENST00000375425 MSANTD4Q8NCY6 345 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 GPT2Q8TD30 523 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 SERAC1Q96JX3 654 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 CFAP57Q96MR6 1250 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 PSMB7Q99436 277 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 FAM207AQ9NSI2 230 aaPredicted RBP14.6□□□□□ -0.07
NELFE-201ENST00000375425 FANCLQ9NW38 375 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 MPP6Q9NZW5 540 aa14.6□□□□□ -0.07
NELFE-201ENST00000375425 A0A0D9SEW6 157 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 A0A1W2PR77 199 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 E9PAM4 449 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 PCDHGA12O60330 932 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 SNAP91O60641 907 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 RTN2O75298 545 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 TPM2P07951 284 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 ATXN1LP0C7T5 689 aaKnown RBP14.59□□□□□ -0.07
NELFE-201ENST00000375425 SRCP12931 536 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 OR1E1P30953 314 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 GRK6P43250 576 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 PPP2CBP62714 309 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 PPP2CAP67775 309 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 ARTNQ5T4W7 220 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 ACBD5Q5T8D3 534 aaPredicted RBP14.59□□□□□ -0.07
NELFE-201ENST00000375425 BNIPLQ7Z465 357 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 TFAP2DQ7Z6R9 452 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 ZNF677Q86XU0 584 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 ATP11CQ8NB49 1132 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 PIP4K2CQ8TBX8 421 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 SLC20A1Q8WUM9 679 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 ZCCHC14Q8WYQ9 949 aaKnown RBP14.59□□□□□ -0.07
NELFE-201ENST00000375425 FAM131CQ96AQ9 280 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 HAPLN3Q96S86 360 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 ELF4Q99607 663 aaPredicted RBP14.59□□□□□ -0.07
NELFE-201ENST00000375425 C2orf49Q9BVC5 232 aaPredicted RBP14.59□□□□□ -0.07
NELFE-201ENST00000375425 KDM4CQ9H3R0 1056 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 NLRC4Q9NPP4 1024 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 TOR4AQ9NXH8 423 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 ARHGAP20Q9P2F6 1191 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 TPX2Q9ULW0 747 aaKnown RBP14.59□□□□□ -0.07
NELFE-201ENST00000375425 HS3ST2Q9Y278 367 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 IGF2RP11717 2491 aa14.59□□□□□ -0.07
NELFE-201ENST00000375425 IGLV3-10A0A075B6K4 115 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 A0A1B0GTQ1 180 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 GOLGA8CPA6NN73 597 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 C1QTNF3-AMACRE9PGA6 284 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 K7ERQ8 282 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 EPHB6O15197 1021 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 ALOX15BO15296 676 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 SLC7A4O43246 635 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 LATO43561 262 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 CYP1A1P04798 512 aaPredicted RBP14.58□□□□□ -0.07
NELFE-201ENST00000375425 CHRNB2P17787 502 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 FMO1Q01740 532 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 CDR2Q01850 454 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 CNTN1Q12860 1018 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 FKBP15Q5T1M5 1219 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 RBM43Q6ZSC3 357 aaKnown RBP14.58□□□□□ -0.07
NELFE-201ENST00000375425 ARCQ7LC44 396 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 PHLDB2Q86SQ0 1253 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 PRPF39Q86UA1 669 aaKnown RBP14.58□□□□□ -0.07
NELFE-201ENST00000375425 FAM131BQ86XD5 332 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 EMC1Q8N766 993 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 VPS51Q9UID3 782 aa14.58□□□□□ -0.07
NELFE-201ENST00000375425 NOCTQ9UK39 431 aaKnown RBP14.58□□□□□ -0.07
NELFE-201ENST00000375425 FARP1Q9Y4F1 1045 aaPredicted RBP14.58□□□□□ -0.07
NELFE-201ENST00000375425 CHD6Q8TD26 2715 aa14.58□□□□□ -0.08
NELFE-201ENST00000375425 SMAD6O43541 496 aaKnown RBP14.58□□□□□ -0.08
NELFE-201ENST00000375425 TNFSF14O43557 240 aa14.58□□□□□ -0.08
NELFE-201ENST00000375425 PLRG1O43660 514 aaKnown RBP14.58□□□□□ -0.08
NELFE-201ENST00000375425 ENDOD1O94919 500 aa14.58□□□□□ -0.08
NELFE-201ENST00000375425 CTSLP07711 333 aa14.58□□□□□ -0.08
NELFE-201ENST00000375425 RRM1P23921 792 aa14.58□□□□□ -0.08
NELFE-201ENST00000375425 MAT2AP31153 395 aaKnown RBP14.58□□□□□ -0.08
NELFE-201ENST00000375425 SOX5P35711 763 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms