RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 MYF6P23409 242 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 PPARGP37231 505 aaPredicted RBP11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 SERPINB9P50453 376 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 C21orf59P57076 290 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 NME3Q13232 169 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 TSTD2Q5T7W7 516 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 LGSNQ5TDP6 509 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 GPR141Q7Z602 305 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 PCDH20Q8N6Y1 951 aaKnown RBP11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 SGCDQ92629 289 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 FBXL20Q96IG2 436 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 AGAP2Q99490 1192 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 TARS2Q9BW92 718 aaKnown RBP11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 GBA3Q9H227 469 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 A8MU76 341 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 PIGRP01833 764 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 CCDC130P13994 396 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 NFATC3Q12968 1075 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 TRIM25Q14258 630 aaKnown RBP11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 OXA1LQ15070 435 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 SLC36A3Q495N2 470 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 DEPDC1Q5TB30 811 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 GK5Q6ZS86 529 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 RAVER1Q8IY67 606 aaKnown RBP11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 USP33Q8TEY7 942 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 TPK1Q9H3S4 243 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 TCAF1Q9Y4C2 921 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 ZFC3H1O60293 1989 aaKnown RBP11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 C2CD4BA6NLJ0 364 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 TARM1B6A8C7 271 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 B4GAT1O43505 415 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 TIPRLO75663 272 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 TPSB2P20231 275 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 CDH8P55286 799 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 TPSAB1Q15661 275 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 INSCQ1MX18 579 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 EGFLAMQ63HQ2 1017 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 XAF1Q6GPH4 301 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 CCDC60Q8IWA6 550 aaPredicted RBP11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 DCLK2Q8N568 766 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 SYTL5Q8TDW5 730 aaPredicted RBP11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 TRPC4APQ8TEL6 797 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 STARD8Q92502 1023 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 CEP170P1Q96L14 293 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 ALPK1Q96QP1 1244 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 OXSMQ9NWU1 459 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 TUBA8Q9NY65 449 aaPredicted RBP11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 SNX13Q9Y5W8 968 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 RLFQ13129 1914 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 KLRG2A4D1S0 409 aaPredicted RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 TK2O00142 265 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 GCATO75600 419 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 HSPA1AP0DMV8 641 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 HSPA1BP0DMV9 641 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 CDH3P22223 829 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 CNTFP26441 200 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 HMOX2P30519 316 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 YAP1P46937 504 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 MAPK10P53779 464 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 SEMA5AQ13591 1074 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 FSCBQ5H9T9 825 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 OLFML1Q6UWY5 402 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 CYHR1Q6ZMK1 362 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 ANKFN1Q8N957 763 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 ITPKCQ96DU7 683 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 TMA16Q96EY4 203 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 MAELQ96JY0 434 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 ZNF641Q96N77 438 aaPredicted RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 POLR3FQ9H1D9 316 aaPredicted RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 LHX5Q9H2C1 402 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 SOX17Q9H6I2 414 aaPredicted RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 SUCOQ9UBS9 1254 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 CCPG1Q9ULG6 757 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 GIT1Q9Y2X7 761 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 PFKMP08237 780 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 PABPC1P11940 636 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 ZNF143P52747 638 aaPredicted RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 IFITM2Q01629 132 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 KIZQ2M2Z5 673 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 CCDC14Q49A88 953 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 ARL13AQ5H913 290 aaPredicted RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 FSTL4Q6MZW2 842 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 CYP2R1Q6VVX0 501 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 ATXN7L3BQ96GX2 97 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 MRPL11Q9Y3B7 192 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 BMP2P12643 396 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 TFEBP19484 476 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 ATP6V1B2P21281 511 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 GPD2P43304 727 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 ATXN1P54253 815 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 MOGQ16653 247 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 PHKG1Q16816 387 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 C6orf183Q5T699 404 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 USP37Q86T82 979 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 LPGAT1Q92604 370 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 TMEM143Q96AN5 459 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 SLC39A3Q9BRY0 314 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 TBC1D23Q9NUY8 699 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms