RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 ZSCAN5DPP0CG00 497 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 CCNCP24863 283 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 HLA-FP30511 346 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 CD70P32970 193 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 CSKP41240 450 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 VPS41P49754 854 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 LMAN2Q12907 356 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 RUNX3Q13761 415 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 NAA30Q147X3 362 aaPredicted RBP11.19□□□□□ -0.62
BRCC3-204ENST00000369462 AAK1Q2M2I8 961 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 CCDC70Q6NSX1 233 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 LEKR1Q6ZMV7 388 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 SLCO2A1Q92959 643 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 TSGA13Q96PP4 275 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 CEP41Q9BYV8 373 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 KDM4CQ9H3R0 1056 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 BRD9Q9H8M2 597 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 KCNK12Q9HB15 430 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 SP110Q9HB58 689 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 KIAA1522Q9P206 1035 aaPredicted RBP11.19□□□□□ -0.62
BRCC3-204ENST00000369462 DMGDHQ9UI17 866 aaKnown RBP11.19□□□□□ -0.62
BRCC3-204ENST00000369462 CFAP69A5D8W1 941 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 CBX4O00257 560 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 TRIM24O15164 1050 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 GLDCP23378 1020 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 ETFBP38117 255 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 GLE1Q53GS7 698 aaKnown RBP11.19□□□□□ -0.62
BRCC3-204ENST00000369462 ASTLQ6HA08 431 aaPredicted RBP11.19□□□□□ -0.62
BRCC3-204ENST00000369462 ZNF783Q6ZMS7 281 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 CCDC13Q8IYE1 715 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 FERMT1Q9BQL6 677 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 TRIM31Q9BZY9 425 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 HPCAL4Q9UM19 191 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 VCANP13611 3396 aa11.19□□□□□ -0.62
BRCC3-204ENST00000369462 ZSCAN5CA6NGD5 496 aaPredicted RBP11.18□□□□□ -0.62
BRCC3-204ENST00000369462 HOXC11O43248 304 aaPredicted RBP11.18□□□□□ -0.62
BRCC3-204ENST00000369462 CACNG3O60359 315 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 HEXIM1O94992 359 aaKnown RBP11.18□□□□□ -0.62
BRCC3-204ENST00000369462 KRT14P02533 472 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 IL9P15248 144 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 OXCT1P55809 520 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 TUBB4BP68371 445 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 NR1H3Q13133 447 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 APCDD1Q8J025 514 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 CPA6Q8N4T0 437 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 XPO6Q96QU8 1125 aaKnown RBP11.18□□□□□ -0.62
BRCC3-204ENST00000369462 DNAJC17Q9NVM6 304 aaKnown RBP11.18□□□□□ -0.62
BRCC3-204ENST00000369462 OR51B4Q9Y5P0 310 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 RNF103O00237 685 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 MATN3O15232 486 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 SNAP91O60641 907 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 JCHAINP01591 159 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 CCNB1P14635 433 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 ACTN2P35609 894 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 CLCN6P51797 869 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 ZNF33AQ06730 810 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 WASHC5Q12768 1159 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 PLEKHG6Q3KR16 790 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 TIGD7Q6NT04 549 aaPredicted RBP11.18□□□□□ -0.62
BRCC3-204ENST00000369462 C12orf40Q86WS4 652 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 TAB3Q8N5C8 712 aaPredicted RBP11.18□□□□□ -0.62
BRCC3-204ENST00000369462 MYRIPQ8NFW9 859 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 CCDC110Q8TBZ0 833 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 USP33Q8TEY7 942 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 ALG14Q96F25 216 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 ACE2Q9BYF1 805 aaPredicted RBP11.18□□□□□ -0.62
BRCC3-204ENST00000369462 WDR70Q9NW82 654 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 ASIC3Q9UHC3 531 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 INTS6Q9UL03 887 aaKnown RBP11.18□□□□□ -0.62
BRCC3-204ENST00000369462 FAM50BQ9Y247 325 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 NEU2Q9Y3R4 380 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 F5P12259 2224 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 TRIOO75962 3097 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 SHROOM3Q8TF72 1996 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 MYO10Q9HD67 2058 aa11.18□□□□□ -0.62
BRCC3-204ENST00000369462 FAM187AA6NFU0 413 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 MTSS1O43312 755 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 KDELR3O43731 214 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 PRAMEF11O60813 436 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 TULP3O75386 442 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ASGR2P07307 311 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 GUCY2DQ02846 1103 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 IL10RBQ08334 325 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ZNF557Q8N988 423 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 RTP4Q96DX8 246 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 AGAP3Q96P47 875 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ERP44Q9BS26 406 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 SLC2A11Q9BYW1 496 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 GGA2Q9UJY4 613 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 UTP11Q9Y3A2 253 aaKnown RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ACTL7AQ9Y615 435 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ESYT3A0FGR9 886 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ARNTLO00327 626 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 STK10O94804 968 aaKnown RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 PTPN3P26045 913 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 GJA4P35212 333 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 RPL22P35268 128 aaKnown RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 DGKGP49619 791 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 TERF1P54274 439 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ZBTB17Q13105 803 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms