RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 NPLOC4Q8TAT6 608 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 DCAKDQ8WVC6 231 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 PPP1R2P1Q96PQ5 205 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 KLHL5Q96PQ7 755 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 GCNAQ96QF7 691 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 BRD8Q9H0E9 1235 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 ZCWPW1Q9H0M4 648 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 STARD7Q9NQZ5 370 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 ABCC13Q9NSE7 274 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 SLC27A5Q9Y2P5 690 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 IGKV6D-21A0A0A0MT36 114 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 C2P06681 752 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 ATP6V1B1P15313 513 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 ACADSP16219 412 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 TPSB2P20231 275 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 EPHA3P29320 983 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 PRKAA1Q13131 559 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 ZNF177Q13360 481 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 TPSAB1Q15661 275 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 TMCO4Q5TGY1 634 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 LRRC8BQ6P9F7 803 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 SLC4A5Q9BY07 1137 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 ACE2Q9BYF1 805 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 TRIM15Q9C019 465 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 MRPL40Q9NQ50 206 aaKnown RBP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 TBC1D13Q9NVG8 400 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 H0Y626 953 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 LRIG2O94898 1065 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 TOP3BO95985 862 aaKnown RBP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 YWHAQP27348 245 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 RECQLP46063 649 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 SLC11A2P49281 568 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 POLD3Q15054 466 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 PCBP1Q15365 356 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 PTRHD1Q6GMV3 140 aaKnown RBP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 ANKRD23Q86SG2 305 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 TMEM110Q86TL2 294 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 SETD3Q86TU7 594 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 SLC35F5Q8WV83 523 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 CDRT15Q96T59 188 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 HNRNPABQ99729 332 aaKnown RBP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 LRMDAQ9H2I8 198 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 DTNAQ9Y4J8 743 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 GCATO75600 419 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 GLP2RO95838 553 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 ALDH2P05091 517 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 HMOX2P30519 316 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 GABRB2P47870 512 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 ESRRGP62508 458 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 CLDN10P78369 228 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 BTKQ06187 659 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 DLG2Q15700 870 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 PCID2Q5JVF3 399 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 SPRYD7Q5W111 196 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 LZTR1Q8N653 840 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 SH3TC2Q8TF17 1288 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 POMKQ9H5K3 350 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 CCDC134Q9H6E4 229 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 ZNF358Q9NW07 568 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 MARCH2Q9P0N8 246 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 PADI3Q9ULW8 664 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 RNF112Q9ULX5 631 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 SLC12A4Q9UP95 1085 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 LTBP3Q9NS15 1303 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 NT5C1B-RDH14C9J2C7 533 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 PAGE1O75459 146 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 SNAI1O95863 264 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-206ENST00000368215 MT-CYBP00156 380 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-206ENST00000368215 PYGLP06737 847 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 DNAJB2P25686 324 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 CDH5P33151 784 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-206ENST00000368215 SKIV2L2P42285 1042 aaKnown RBP8.6□□□□□ -1.03
PTPRK-206ENST00000368215 GRIA4P48058 902 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 CDK7P50613 346 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 OXCT1P55809 520 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 GHRHRQ02643 423 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 DPYSL2Q16555 572 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 TEX44Q53QW1 395 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 AP1ARQ63HQ0 302 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 ARHGAP17Q68EM7 881 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 DEFB128Q7Z7B8 93 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 LGI2Q8N0V4 545 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 PQLC3Q8N755 202 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 KYQ8NBH2 561 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 DENND2DQ9H6A0 471 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-206ENST00000368215 WDR55Q9H6Y2 383 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-206ENST00000368215 RGS18Q9NS28 235 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 CCDC167Q9P0B6 97 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 HBS1LQ9Y450 684 aaKnown RBP8.6□□□□□ -1.03
PTPRK-206ENST00000368215 ECM29Q5VYK3 1845 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 SMCHD1A6NHR9 2005 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 GSC2O15499 205 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 MGRN1O60291 552 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 ALDH1A3P47895 512 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 STX5Q13190 355 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 PTK2BQ14289 1009 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 FAM187BQ17R55 369 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 FUT11Q495W5 492 aa8.6□□□□□ -1.03
PTPRK-206ENST00000368215 TMTC4Q5T4D3 741 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms