RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 ZBTB7AO95365 584 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 JAK1P23458 1154 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 TNK2Q07912 1038 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 PCID2Q5JVF3 399 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 NEPROQ6NW34 567 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 PPP1R14BQ96C90 147 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 FAM120BQ96EK7 910 aaKnown RBP19.61■□□□□ 0.73
USP48-201ENST00000308271 CELF6Q96J87 481 aaKnown RBP19.61■□□□□ 0.73
USP48-201ENST00000308271 PCDH18Q9HCL0 1135 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 PLIN3O60664 434 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 ADSLP30566 484 aaPredicted RBP19.61■□□□□ 0.73
USP48-201ENST00000308271 MTTPP55157 894 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 NR6A1Q15406 480 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 TATDN1Q6P1N9 297 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 FBXO39Q8N4B4 442 aa19.61■□□□□ 0.73
USP48-201ENST00000308271 WDR55Q9H6Y2 383 aaPredicted RBP19.61■□□□□ 0.73
USP48-201ENST00000308271 NCF1BA6NI72 391 aaPredicted RBP19.6■□□□□ 0.73
USP48-201ENST00000308271 NCF1CA8MVU1 366 aaPredicted RBP19.6■□□□□ 0.73
USP48-201ENST00000308271 TRIM24O15164 1050 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 KATNA1O75449 491 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 NPM3O75607 178 aaKnown RBP19.6■□□□□ 0.73
USP48-201ENST00000308271 NCF1P14598 390 aaPredicted RBP19.6■□□□□ 0.73
USP48-201ENST00000308271 ATP6V1E1P36543 226 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 SLC35G1Q2M3R5 365 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 RSBN1Q5VWQ0 802 aaPredicted RBP19.6■□□□□ 0.73
USP48-201ENST00000308271 FAM126BQ8IXS8 530 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 FIG4Q92562 907 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 TBL1YQ9BQ87 522 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 MRPL57Q9BQC6 102 aaKnown RBP19.6■□□□□ 0.73
USP48-201ENST00000308271 MTG1Q9BT17 334 aaPredicted RBP19.6■□□□□ 0.73
USP48-201ENST00000308271 DGCR6LQ9BY27 220 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 KLK14Q9P0G3 267 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 C2orf81A6NN90 581 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 MSX2P35548 267 aaPredicted RBP19.6■□□□□ 0.73
USP48-201ENST00000308271 PPIL2Q13356 520 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 MAPRE1Q15691 268 aaKnown RBP19.6■□□□□ 0.73
USP48-201ENST00000308271 SZRD1Q7Z422 152 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 CEP44Q9C0F1 390 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 PRDM12Q9H4Q4 367 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 TMEM161AQ9NX61 479 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 WWOXQ9NZC7 414 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 ST13P50502 369 aaKnown RBP19.6■□□□□ 0.73
USP48-201ENST00000308271 ARMCX4Q5H9R4 360 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 RALGPS1Q5JS13 557 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 AARS2Q5JTZ9 985 aaKnown RBP19.6■□□□□ 0.73
USP48-201ENST00000308271 C6orf52Q5T4I8 152 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 APOL5Q9BWW9 433 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 NDEL1Q9GZM8 345 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 VPS45Q9NRW7 570 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 RGS18Q9NS28 235 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 KIF1AQ12756 1690 aa19.6■□□□□ 0.73
USP48-201ENST00000308271 BCLAF3A2AJT9 711 aaKnown RBP19.59■□□□□ 0.73
USP48-201ENST00000308271 LTA4HP09960 611 aaKnown RBP19.59■□□□□ 0.73
USP48-201ENST00000308271 TCEAL1Q15170 157 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 CCDC80Q76M96 950 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 LZTR1Q8N653 840 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 ATG16L2Q8NAA4 619 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 SLC4A11Q8NBS3 891 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 KCTD4Q8WVF5 259 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 LENG8Q96PV6 779 aaPredicted RBP19.59■□□□□ 0.73
USP48-201ENST00000308271 C8orf4Q9NR00 106 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 LIMD1Q9UGP4 676 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 LTN1O94822 1766 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 IGKV6D-41A0A0C4DH26 115 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 CNOT3O75175 753 aaKnown RBP19.59■□□□□ 0.73
USP48-201ENST00000308271 MSH3P20585 1137 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 MAP3K7CLP57077 242 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 RRM2BQ7LG56 351 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 RELL1Q8IUW5 271 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 OR7A2PQ8NGA2 310 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 APOL4Q9BPW4 351 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 NOL6Q9H6R4 1146 aaKnown RBP19.59■□□□□ 0.73
USP48-201ENST00000308271 ENTPD7Q9NQZ7 604 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 XPR1Q9UBH6 696 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 ZMYND8Q9ULU4 1186 aaPredicted RBP19.59■□□□□ 0.73
USP48-201ENST00000308271 UBR1Q8IWV7 1749 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 PNMA8CA0A1B0GUJ8 204 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 HS6ST1O60243 411 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 C2P06681 752 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 KLRC2P26717 231 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 POU5F1Q01860 360 aaKnown RBP19.59■□□□□ 0.73
USP48-201ENST00000308271 MYO1HQ8N1T3 1032 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 CNTD1Q8N815 330 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 DUOX1Q9NRD9 1551 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 NELFEP18615 380 aaKnown RBP19.59■□□□□ 0.73
USP48-201ENST00000308271 RECQLP46063 649 aaPredicted RBP19.59■□□□□ 0.73
USP48-201ENST00000308271 INAQ16352 499 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 TMEM26Q6ZUK4 368 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 PLD5Q8N7P1 536 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 FNDC5Q8NAU1 212 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 SLC35B2Q8TB61 432 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 FAM136AQ96C01 138 aa19.59■□□□□ 0.73
USP48-201ENST00000308271 NFASCO94856 1347 aa19.58■□□□□ 0.73
USP48-201ENST00000308271 KLF11O14901 512 aa19.58■□□□□ 0.73
USP48-201ENST00000308271 VTNP04004 478 aa19.58■□□□□ 0.73
USP48-201ENST00000308271 SLURP2P0DP57 97 aa19.58■□□□□ 0.73
USP48-201ENST00000308271 NOS2P35228 1153 aa19.58■□□□□ 0.73
USP48-201ENST00000308271 TNFSF9P41273 254 aa19.58■□□□□ 0.73
USP48-201ENST00000308271 RAB10P61026 200 aa19.58■□□□□ 0.73
USP48-201ENST00000308271 UNC93AQ86WB7 457 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms