RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 TMCO4Q5TGY1 634 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 ARMC3Q5W041 872 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 BSPRYQ5W0U4 402 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 IRGCQ6NXR0 463 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 AAGABQ6PD74 315 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 FBXO46Q6PJ61 603 aaPredicted RBP25.56■■□□□ 1.68
ROM1-201ENST00000278833 STRA8Q7Z7C7 330 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 PLCD3Q8N3E9 789 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 ZSCAN18Q8TBC5 510 aaPredicted RBP25.56■■□□□ 1.68
ROM1-201ENST00000278833 ZFP42Q96MM3 310 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 APBA2Q99767 749 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 OSBPL2Q9H1P3 480 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 PIH1D1Q9NWS0 290 aaKnown RBP25.56■■□□□ 1.68
ROM1-201ENST00000278833 DDIT4Q9NX09 232 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 FLRT1Q9NZU1 646 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 ANKRD6Q9Y2G4 727 aa25.56■■□□□ 1.68
ROM1-201ENST00000278833 NCAM1P13591 858 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 PAX3P23760 479 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 NUMBP49757 651 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 IRX4P78413 519 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 MRPS6P82932 125 aaKnown RBP25.55■■□□□ 1.68
ROM1-201ENST00000278833 ZBTB17Q13105 803 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 UBAP2LQ14157 1087 aaKnown RBP25.55■■□□□ 1.68
ROM1-201ENST00000278833 PPM1JQ5JR12 505 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 NAPEPLDQ6IQ20 393 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 FSTL4Q6MZW2 842 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 SREK1Q8WXA9 508 aaKnown RBP25.55■■□□□ 1.68
ROM1-201ENST00000278833 FAM105AQ9NUU6 356 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 SLC7A8Q9UHI5 535 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 GIT1Q9Y2X7 761 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 TRPV2Q9Y5S1 764 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 MYBPHLA2RUH7 354 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 SIN3BO75182 1162 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 FKBP6O75344 327 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 ELNP15502 786 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 ARRB2P32121 409 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 KDSRQ06136 332 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 LBRQ14739 615 aaKnown RBP25.55■■□□□ 1.68
ROM1-201ENST00000278833 METTL21CQ5VZV1 264 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 LINC00523Q86TU6 105 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 NETO2Q8NC67 525 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 PPFIBP2Q8ND30 876 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 PANX3Q96QZ0 392 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 KIFC1Q9BW19 673 aa25.55■■□□□ 1.68
ROM1-201ENST00000278833 PTPRDP23468 1912 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 G3V2L1 256 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 CCNT2O60583 730 aaKnown RBP25.54■■□□□ 1.68
ROM1-201ENST00000278833 IGLV3-25P01717 112 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 AMHP03971 560 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 THP07101 528 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 POLD2P49005 469 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 PURAQ00577 322 aaKnown RBP25.54■■□□□ 1.68
ROM1-201ENST00000278833 MPP3Q13368 585 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 ATG14Q6ZNE5 492 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 RIPOR1Q6ZS17 1223 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 KCNMB4Q86W47 210 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 PPP1R13LQ8WUF5 828 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 GPR22Q99680 433 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 MCOLN1Q9GZU1 580 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 TMEM30AQ9NV96 361 aa25.54■■□□□ 1.68
ROM1-201ENST00000278833 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.54■■□□□ 1.68
ROM1-201ENST00000278833 KPNA6O60684 536 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 C6orf222P0C671 652 aaPredicted RBP25.53■■□□□ 1.68
ROM1-201ENST00000278833 SKIP12755 728 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 NFKB1P19838 968 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 HOXC13P31276 330 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 CDH17Q12864 832 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 EIF4EBP2Q13542 120 aaPredicted RBP25.53■■□□□ 1.68
ROM1-201ENST00000278833 PRPSAP1Q14558 356 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 TRIB2Q92519 343 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 LENG1Q96BZ8 264 aaPredicted RBP25.53■■□□□ 1.68
ROM1-201ENST00000278833 PPP1R2P1Q96PQ5 205 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 OSBPL1AQ9BXW6 950 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 A0A088AWK7 358 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 A0A096LPK6 155 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 CYP11A1P05108 521 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 USP17L7P0C7H9 530 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 COPAP53621 1224 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 ITGA9Q13797 1035 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 PDPK2PQ6A1A2 396 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 CES3Q6UWW8 571 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 MRPL10Q7Z7H8 261 aaKnown RBP25.53■■□□□ 1.68
ROM1-201ENST00000278833 CMC1Q7Z7K0 106 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 DNAAF3Q8N9W5 541 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 URGCPQ8TCY9 931 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 CDH19Q9H159 772 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 WDCPQ9H6R7 721 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 PNPOQ9NVS9 261 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 NEU3Q9UQ49 428 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 SCN10AQ9Y5Y9 1956 aa25.53■■□□□ 1.68
ROM1-201ENST00000278833 RPLP2P05387 115 aaKnown RBP25.52■■□□□ 1.68
ROM1-201ENST00000278833 GRK4P32298 578 aa25.52■■□□□ 1.68
ROM1-201ENST00000278833 CACNA2D1P54289 1103 aa25.52■■□□□ 1.68
ROM1-201ENST00000278833 KLC1Q07866 573 aa25.52■■□□□ 1.68
ROM1-201ENST00000278833 FAM171BQ6P995 826 aa25.52■■□□□ 1.68
ROM1-201ENST00000278833 PGM2L1Q6PCE3 622 aa25.52■■□□□ 1.68
ROM1-201ENST00000278833 EPGNQ6UW88 154 aa25.52■■□□□ 1.68
ROM1-201ENST00000278833 CNTN4Q8IWV2 1026 aa25.52■■□□□ 1.68
ROM1-201ENST00000278833 PXYLP1Q8TE99 480 aa25.52■■□□□ 1.68
ROM1-201ENST00000278833 SCG3Q8WXD2 468 aaKnown RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms