RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 DCTP40126 519 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 SGSHP51688 502 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 NEK4P51957 841 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 CLDN2P57739 230 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 ANAPC15P60006 121 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 CDH18Q13634 790 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 PSMD6Q15008 389 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 RFWD3Q6PCD5 774 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 Q6ZSR6 202 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 PTAR1Q7Z6K3 402 aaPredicted RBP11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 B3GNT8Q7Z7M8 397 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 FIBINQ8TAL6 211 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 FAM174AQ8TBP5 190 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 RNF139Q8WU17 664 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 MOCOSQ96EN8 888 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 TMEM74Q96NL1 305 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 CATSPER2Q96P56 530 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 SPAG5Q96R06 1193 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 GFM1Q96RP9 751 aaKnown RBP11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 SLC12A9Q9BXP2 914 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 SRRTQ9BXP5 876 aaKnown RBP11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 FOXP3Q9BZS1 431 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 DNAI2Q9GZS0 605 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 SDCBP2Q9H190 292 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 VRTNQ9H8Y1 702 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 FZD3Q9NPG1 666 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 OLA1Q9NTK5 396 aaKnown RBP11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 HMGXB4Q9UGU5 601 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 SLCO3A1Q9UIG8 710 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 HBS1LQ9Y450 684 aaKnown RBP11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 LOXL2Q9Y4K0 774 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 TP53BP1Q12888 1972 aaPredicted RBP11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 A0A1W2PQU0 124 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 A6NNZ2 444 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 IRAK2O43187 625 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 NME1P15531 152 aaKnown RBP11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 COL8A1P27658 744 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 CD82P27701 267 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 LONP1P36776 959 aaKnown RBP11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 CTSOP43234 321 aaPredicted RBP11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 SLC11A2P49281 568 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 ATP1A2P50993 1020 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 METAP1P53582 386 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 MLLT10P55197 1068 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 CYP24A1Q07973 514 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 CNTN1Q12860 1018 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 KLRB1Q12918 225 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 NCOA4Q13772 614 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 GSE1Q14687 1217 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 TMEM164Q5U3C3 297 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 PIK3R6Q5UE93 754 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 ESRP1Q6NXG1 681 aaKnown RBP11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 SV2BQ7L1I2 683 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 MAMDC2Q7Z304 686 aaPredicted RBP11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 PARGQ86W56 976 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 HEATR4Q86WZ0 1026 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 SLC22A18ASQ8N1D0 253 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 CARNMT1Q8N4J0 409 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 JPH3Q8WXH2 748 aaPredicted RBP11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 ZNF516Q92618 1163 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 PTPRN2Q92932 1015 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 RPL10LQ96L21 214 aaKnown RBP11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 NOX5Q96PH1 765 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 IRX2Q9BZI1 471 aaPredicted RBP11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 CUEDC1Q9NWM3 386 aaPredicted RBP11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 PADI4Q9UM07 663 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 MYH10P35580 1976 aa11.36□□□□□ -0.59
PTP4A1-207ENST00000639568 ITIH6Q6UXX5 1313 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 C1QTNF3-AMACRE9PGA6 284 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 AGRPO00253 132 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 NTN3O00634 580 aaPredicted RBP11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 CASC3O15234 703 aaKnown RBP11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 ZNF18P17022 549 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 JUNDP17535 347 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 ITIH1P19827 911 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 GNLYP22749 145 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 UQCRFS1P47985 274 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 MAPK10P53779 464 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 CCDC15Q0P6D6 951 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 LACTB2Q53H82 288 aaPredicted RBP11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 PITRM1Q5JRX3 1037 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 AGBL4Q5VU57 503 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 OR6B2Q6IFH4 312 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 NEK5Q6P3R8 708 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 ABI3BPQ7Z7G0 1075 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 DTX1Q86Y01 620 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 TEX19Q8NA77 164 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 HJURPQ8NCD3 748 aaPredicted RBP11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 OR8D1Q8WZ84 308 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 USP7Q93009 1102 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 FAM131CQ96AQ9 280 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 TMEM159Q96B96 161 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 ELMO3Q96BJ8 720 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 PPP1R13BQ96KQ4 1090 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 BOCQ9BWV1 1114 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 DUSP16Q9BY84 665 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 FGFBP2Q9BYJ0 223 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 PANK4Q9NVE7 773 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 FOXJ2Q9P0K8 574 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms