RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 EEF1DP3Q658K8 133 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 RIOX2Q8IUF8 465 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 PJA1Q8NG27 643 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 SVIPQ8NHG7 77 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 TFAP2BQ92481 460 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 ZNF669Q96BR6 464 aaPredicted RBP10.63□□□□□ -0.71
LIG1-220ENST00000601091 LENG1Q96BZ8 264 aaPredicted RBP10.63□□□□□ -0.71
LIG1-220ENST00000601091 KCNK16Q96T55 309 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 BRD7Q9NPI1 651 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 THAP1Q9NVV9 213 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 KCNK4Q9NYG8 393 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 KAT6AQ92794 2004 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 SCN7AQ01118 1682 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 WFS1O76024 890 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 TOMM70O94826 608 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 CHEK2O96017 543 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 CHRNB1P11230 501 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 SLC6A3Q01959 620 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 MED21Q13503 144 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 AMHR2Q16671 573 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 TRMT5Q32P41 509 aaKnown RBP10.63□□□□□ -0.71
LIG1-220ENST00000601091 DCAF4L1Q3SXM0 396 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 CLNKQ7Z7G1 428 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 FAM131BQ86XD5 332 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 ICA1LQ8NDH6 482 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 FAM13CQ8NE31 585 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 C7orf43Q8WVR3 580 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 VPS39Q96JC1 886 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 CGREF1Q99674 301 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 TRIM56Q9BRZ2 755 aaKnown RBP10.63□□□□□ -0.71
LIG1-220ENST00000601091 EFHD1Q9BUP0 239 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 EPB41L4BQ9H329 900 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 ETNK2Q9NVF9 386 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 RABGEF1Q9UJ41 708 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 ZNF214Q9UL59 606 aaPredicted RBP10.63□□□□□ -0.71
LIG1-220ENST00000601091 DNAJC16Q9Y2G8 782 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 PPP2R3BQ9Y5P8 575 aa10.63□□□□□ -0.71
LIG1-220ENST00000601091 TYW5A2RUC4 315 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 C2orf71A6NGG8 1288 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 CASQ2O14958 399 aaPredicted RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 PIGRP01833 764 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 PAMP19021 973 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 GRK2P25098 689 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 PBLDP30039 288 aaPredicted RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 BCAT1P54687 386 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 PLD1Q13393 1074 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 GLRA4Q5JXX5 417 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 FNBP1LQ5T0N5 605 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 KCNT2Q6UVM3 1135 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 PPWD1Q96BP3 646 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 GMLQ99445 158 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 SSU72Q9NP77 194 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 LAMP5Q9UJQ1 280 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 UBQLN1Q9UMX0 589 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 FAM237BA0A1B0GVD1 139 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 E2F8A0AVK6 867 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 HMOX2P30519 316 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 ICAM3P32942 547 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 STX1BP61266 288 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 RUNX1T1Q06455 604 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 KLF1Q13351 362 aaPredicted RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 CYLC2Q14093 348 aaPredicted RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 FASTKD1Q53R41 847 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 ANKRD22Q5VYY1 191 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 NOTUMQ6P988 496 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 METTL3Q86U44 580 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 ZDHHC17Q8IUH5 632 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 CPSF3Q9UKF6 684 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 CHKBQ9Y259 395 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 LRCH1Q9Y2L9 728 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 FAM32AQ9Y421 112 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 CNTNAP1P78357 1384 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 ARHGAP10A1A4S6 786 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 B4GALT5O43286 388 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 SEMA3DO95025 777 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 PTDSS1P48651 473 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 TUBP50607 506 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 SLC18A1P54219 525 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 B2MP61769 119 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 RPL10AP62906 217 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 OLR1P78380 273 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 KPNB1Q14974 876 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 OASLQ15646 514 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 ANKRD20A4Q4UJ75 823 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 CELF3Q5SZQ8 465 aaKnown RBP10.62□□□□□ -0.71
LIG1-220ENST00000601091 PLPPR4Q7Z2D5 763 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 ERO1BQ86YB8 467 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 AADATQ8N5Z0 425 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 GLIS1Q8NBF1 620 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 COLGALT1Q8NBJ5 622 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 STKLD1Q8NE28 680 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 OR6J1Q8NGC5 347 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 SLC35B2Q8TB61 432 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 UCMAQ8WVF2 138 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 MROH8Q9H579 483 aa10.62□□□□□ -0.71
LIG1-220ENST00000601091 C3orf70A6NLC5 250 aaPredicted RBP10.61□□□□□ -0.71
LIG1-220ENST00000601091 AVILO75366 819 aa10.61□□□□□ -0.71
LIG1-220ENST00000601091 CRYZL1O95825 349 aa10.61□□□□□ -0.71
LIG1-220ENST00000601091 BST1Q10588 318 aa10.61□□□□□ -0.71
LIG1-220ENST00000601091 BEND5Q7L4P6 421 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms