RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 ZNF571Q7Z3V5 609 aaPredicted RBP22.93■■□□□ 1.26
GTF2F1-204ENST00000594965 SETD3Q86TU7 594 aaPredicted RBP22.93■■□□□ 1.26
GTF2F1-204ENST00000594965 CCDC185Q8N715 623 aa22.93■■□□□ 1.26
GTF2F1-204ENST00000594965 FAM172AQ8WUF8 416 aa22.93■■□□□ 1.26
GTF2F1-204ENST00000594965 DNASE2BQ8WZ79 361 aa22.93■■□□□ 1.26
GTF2F1-204ENST00000594965 PPP1R9BQ96SB3 815 aa22.93■■□□□ 1.26
GTF2F1-204ENST00000594965 CAPN10Q9HC96 672 aa22.93■■□□□ 1.26
GTF2F1-204ENST00000594965 FSCN3Q9NQT6 498 aa22.93■■□□□ 1.26
GTF2F1-204ENST00000594965 MED19A0JLT2 244 aaPredicted RBP22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 C4orf47A7E2U8 309 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 METTL12A8MUP2 240 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 DNTTP04053 509 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 RHOCP08134 193 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 RRM1P23921 792 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 NRG1Q02297 640 aaPredicted RBP22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 MANEALQ5VSG8 457 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 DCAF12L1Q5VU92 463 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 DNAJC24Q6P3W2 148 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 TFAP2DQ7Z6R9 452 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 DNAAF5Q86Y56 855 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 MMAAQ8IVH4 418 aaKnown RBP22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 RGL4Q8IZJ4 473 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 STK40Q8N2I9 435 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 NUSAP1Q9BXS6 441 aaKnown RBP22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 MUC3BQ9H195 1237 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 OSBPL2Q9H1P3 480 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 PABPC3Q9H361 631 aaKnown RBP22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 VPS28Q9UK41 221 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 PLXNA2O75051 1894 aa22.92■■□□□ 1.26
GTF2F1-204ENST00000594965 CACNA1AO00555 2505 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 A0A0D9SEW6 157 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 TMCO5BA8MYB1 307 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 CCP110O43303 1012 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 ATP9BO43861 1147 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 SNAP91O60641 907 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 SERPINF2P08697 491 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 ENGP17813 658 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 UBASH3AP57075 661 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 TPM4P67936 248 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 CST6Q15828 149 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 SKOR2Q2VWA4 1001 aaPredicted RBP22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 CEP76Q8TAP6 659 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 MCEEQ96PE7 176 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 ZYG11BQ9C0D3 744 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 C6orf106Q9H6K1 298 aaPredicted RBP22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 PPARGC1AQ9UBK2 798 aaKnown RBP22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 SERGEFQ9UGK8 458 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 SLC25A13Q9UJS0 675 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 SLC6A14Q9UN76 642 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 NEU3Q9UQ49 428 aa22.91■■□□□ 1.26
GTF2F1-204ENST00000594965 TP53BP1Q12888 1972 aaPredicted RBP22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 MEI4A8MW99 385 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 FAM72CH0Y354 149 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 DDX3XO00571 662 aaKnown RBP eCLIP22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 MID1O15344 667 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 MT-CO1P00395 513 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 CFIP05156 583 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 SKILP12757 684 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 NNMTP40261 264 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 ZNF143P52747 638 aaPredicted RBP22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 FOXK2Q01167 660 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 OGDHQ02218 1023 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 ARL13BQ3SXY8 428 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 TTC31Q49AM3 519 aaPredicted RBP22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 WDR45BQ5MNZ6 344 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 SYCP2LQ5T4T6 812 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 FAM72AQ5TYM5 149 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 IL31Q6EBC2 164 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 FAM72DQ6L9T8 149 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 USP30Q70CQ3 517 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 FAM72BQ86X60 149 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 SH2D3CQ8N5H7 860 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 NTAN1Q96AB6 310 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 VCPIP1Q96JH7 1222 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 TMEM9BQ9NQ34 198 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 OR12D3Q9UGF7 316 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 SCML1Q9UN30 329 aa22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 ASCC3Q8N3C0 2202 aaKnown RBP22.9■■□□□ 1.26
GTF2F1-204ENST00000594965 SRCP12931 536 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 GLDCP23378 1020 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 OR1E1P30953 314 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 DLG2Q15700 870 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 C6orf118Q5T5N4 469 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 OR7D4Q8NG98 312 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 C1orf216Q8TAB5 229 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 BTBD1Q9H0C5 482 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 PCED1AQ9H1Q7 454 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 FBXL12Q9NXK8 326 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 VPS51Q9UID3 782 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 HS3ST2Q9Y278 367 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 CACNA1EQ15878 2313 aa22.89■■□□□ 1.25
GTF2F1-204ENST00000594965 TMEM131Q92545 1883 aa22.88■■□□□ 1.25
GTF2F1-204ENST00000594965 A0A1W2PP55 124 aa22.88■■□□□ 1.25
GTF2F1-204ENST00000594965 ILVBLA1L0T0 632 aa22.88■■□□□ 1.25
GTF2F1-204ENST00000594965 GOLGA6L19H0YKK7 550 aa22.88■■□□□ 1.25
GTF2F1-204ENST00000594965 RNASEH1O60930 286 aaKnown RBP22.88■■□□□ 1.25
GTF2F1-204ENST00000594965 SEMA4FO95754 770 aa22.88■■□□□ 1.25
GTF2F1-204ENST00000594965 GZMAP12544 262 aa22.88■■□□□ 1.25
GTF2F1-204ENST00000594965 SLC8A1P32418 973 aa22.88■■□□□ 1.25
GTF2F1-204ENST00000594965 PSMD8P48556 350 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms