RNA–Protein interactions for RNA: ENST00000588826.2

RAD23A-205, Transcript of RAD23 homolog A, nucleotide excision repair protein, human

TSL 5

Gene RAD23A, Length 832 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD23A-205	ENST00000588826	GLI1	P08151	1106 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	TBC1D3H	P0C7X1	549 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	HOXB3	P14651	431 aa	Predicted RBP	13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	NUMB	P49757	651 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	PITX1	P78337	314 aa	Predicted RBP	13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	TYRO3	Q06418	890 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	MTA1	Q13330	715 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	COL9A2	Q14055	689 aa	Predicted RBP	13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	TAF5	Q15542	800 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	SMAD1	Q15797	465 aa	Known RBP	13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	TBC1D3G	Q6DHY5	549 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	TBC1D3C	Q6IPX1	549 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	GJB7	Q6PEY0	223 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	C19orf48	Q6RUI8	117 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	DHRS13	Q6UX07	377 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	GBP6	Q6ZN66	633 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	GATAD2A	Q86YP4	633 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	DEFB106A	Q8N104	65 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	OXR1	Q8N573	874 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	OR8D1	Q8WZ84	308 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	PPP1R13B	Q96KQ4	1090 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	RPRD1A	Q96P16	312 aa	Predicted RBP	13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	EBF2	Q9HAK2	575 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	ASNSD1	Q9NWL6	643 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	DKK4	Q9UBT3	224 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	APEX2	Q9UBZ4	518 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	RAX	Q9Y2V3	346 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	DOCK4	Q8N1I0	1966 aa		13.54	□□□□□ -0.24
RAD23A-205	ENST00000588826	FAM149A	A5PLN7	773 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	ENC1	O14682	589 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	SLC7A4	O43246	635 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	WNT1	P04628	370 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	VAV1	P15498	845 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	DRD3	P35462	400 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	HNF1B	P35680	557 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	SNX16	P57768	344 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	KCNJ12	Q14500	433 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	COL28A1	Q2UY09	1125 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	ACCSL	Q4AC99	568 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	PRAMEF14	Q5SWL7	426 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	FAM46C	Q5VWP2	391 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	PASD1	Q8IV76	773 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	PDCD7	Q8N8D1	485 aa	Known RBP	13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	CNDP2	Q96KP4	475 aa	Known RBP	13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	SLC2A13	Q96QE2	648 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	CPXM1	Q96SM3	734 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	PRMT1	Q99873	361 aa	Known RBP	13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	KDM4C	Q9H3R0	1056 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	TSPY26P	Q9H489	355 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	SYNC	Q9H7C4	482 aa		13.53	□□□□□ -0.24
RAD23A-205	ENST00000588826	TDRD6	O60522	2096 aa	Known RBP	13.52	□□□□□ -0.24
RAD23A-205	ENST00000588826	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826		A0A1W2PR77	199 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	TRABD2B	A6NFA1	517 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	BECN2	A8MW95	431 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	C1QTNF3-AMACR	E9PGA6	284 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	TLR4	O00206	839 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	RFPL3	O75679	317 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	GRAP2	O75791	330 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	LDOC1	O95751	146 aa	Predicted RBP	13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	CDK4	P11802	303 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	ZNF18	P17022	549 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	SLC9A1	P19634	815 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	EPHA8	P29322	1005 aa	Predicted RBP	13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	NUDT1	P36639	197 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	PLK1	P53350	603 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	NXPH1	P58417	271 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	PPP2CB	P62714	309 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	PPP2CA	P67775	309 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	CENPC	Q03188	943 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	NME3	Q13232	169 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	ZNF177	Q13360	481 aa	Predicted RBP	13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	EXOC3L4	Q17RC7	722 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	OR6B2	Q6IFH4	312 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	NAPEPLD	Q6IQ20	393 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	CXorf57	Q6NSI4	855 aa	Known RBP	13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	FBXL22	Q6P050	247 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	FAM183BP	Q6ZVS7	135 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	PRPF39	Q86UA1	669 aa	Known RBP	13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	PDZD3	Q86UT5	571 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	TMPRSS12	Q86WS5	348 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	MARCH9	Q86YJ5	346 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	C1orf131	Q8NDD1	294 aa	Known RBP	13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	SAP25	Q8TEE9	199 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	FRS2	Q8WU20	508 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	RWDD2A	Q9UIY3	292 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	VPS28	Q9UK41	221 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	VANGL2	Q9ULK5	521 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	PCDHGC3	Q9UN70	934 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	PCDHGA1	Q9Y5H4	931 aa		13.52	□□□□□ -0.25
RAD23A-205	ENST00000588826	GTPBP10	A4D1E9	387 aa	Known RBP	13.51	□□□□□ -0.25
RAD23A-205	ENST00000588826	C10orf142	B7Z368	130 aa		13.51	□□□□□ -0.25
RAD23A-205	ENST00000588826		E9PAM4	449 aa		13.51	□□□□□ -0.25
RAD23A-205	ENST00000588826	WNT9A	O14904	365 aa		13.51	□□□□□ -0.25
RAD23A-205	ENST00000588826	ALOX15B	O15296	676 aa		13.51	□□□□□ -0.25
RAD23A-205	ENST00000588826	LAT	O43561	262 aa		13.51	□□□□□ -0.25

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