RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 CDO1Q16878 200 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 C15orf59Q2T9L4 293 aaPredicted RBP22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 CCDC14Q49A88 953 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 TFAP2DQ7Z6R9 452 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 HDDC3Q8N4P3 179 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 DEFB124Q8NES8 71 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 BIRC7Q96CA5 298 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 HAPLN3Q96S86 360 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 RTN4Q9NQC3 1192 aaKnown RBP22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 SEPT11Q9NVA2 429 aaKnown RBP22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 ADAM22Q9P0K1 906 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 SLC25A13Q9UJS0 675 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 IGLV3-10A0A075B6K4 115 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 A0A1W2PP55 124 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 C2CD4BA6NLJ0 364 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 SMTNL1A8MU46 457 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 OPHN1O60890 802 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 RNASEH2AO75792 299 aaKnown RBP22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 FSBPO95073 299 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 RHOCP08134 193 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 SDC4P31431 198 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 ZNF165P49910 485 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 SEMA3BQ13214 749 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 ELAVL3Q14576 367 aaKnown RBP22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 ACCSLQ4AC99 568 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 PHF13Q86YI8 300 aaPredicted RBP22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 AADATQ8N5Z0 425 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 PSMB7Q99436 277 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 AGPAT1Q99943 283 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 OMDQ99983 421 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 NEUROG2Q9H2A3 272 aa22.03■■□□□ 1.12
PPP4R1-228ENST00000584074 FAM47DPA6NHR8 397 aa22.02■■□□□ 1.12
PPP4R1-228ENST00000584074 ATP9BO43861 1147 aa22.02■■□□□ 1.12
PPP4R1-228ENST00000584074 IL1BP01584 269 aa22.02■■□□□ 1.12
PPP4R1-228ENST00000584074 KRT3P12035 628 aa22.02■■□□□ 1.12
PPP4R1-228ENST00000584074 CEACAM1P13688 526 aa22.02■■□□□ 1.12
PPP4R1-228ENST00000584074 VASPP50552 380 aaPredicted RBP22.02■■□□□ 1.12
PPP4R1-228ENST00000584074 ACBD5Q5T8D3 534 aaPredicted RBP22.02■■□□□ 1.12
PPP4R1-228ENST00000584074 LRSAM1Q6UWE0 723 aa22.02■■□□□ 1.12
PPP4R1-228ENST00000584074 PIP4P1Q86T03 277 aa22.02■■□□□ 1.12
PPP4R1-228ENST00000584074 DNAAF2Q9NVR5 837 aaKnown RBP22.02■■□□□ 1.12
PPP4R1-228ENST00000584074 CNOT1A5YKK6 2376 aaKnown RBP22.02■■□□□ 1.11
PPP4R1-228ENST00000584074 A0A0D9SEW6 157 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 SNAP91O60641 907 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 ADH1BP00325 375 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 MT-CO1P00395 513 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 IGHV4-34P06331 123 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 FERP16591 822 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 C5AR1P21730 350 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 RFC1P35251 1148 aaPredicted RBP22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 ADRA1BP35368 520 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 PTPN9P43378 593 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 METAP1P53582 386 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 GALCP54803 685 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 BNC1Q01954 994 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 SFSWAPQ12872 951 aaKnown RBP22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 DLG2Q15700 870 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 Q6ZVU0 165 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 MON1BQ7L1V2 547 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 IRF2BP2Q7Z5L9 587 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 SETD3Q86TU7 594 aaPredicted RBP22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 SH2D3CQ8N5H7 860 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 BAP1Q92560 729 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 FUCA2Q9BTY2 467 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 ZDHHC5Q9C0B5 715 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 ADAMTS1Q9UHI8 967 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 VPS51Q9UID3 782 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 FZD4Q9ULV1 537 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 ADAMTS9Q9P2N4 1935 aa22.01■■□□□ 1.11
PPP4R1-228ENST00000584074 PI4KAP42356 2102 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 UPK3BL1B0FP48 263 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 UPK3BL2E5RIL1 263 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 GJB3O75712 270 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 CALB1P05937 261 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 CD59P13987 128 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 GOT1P17174 413 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 CD27P26842 260 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 PMLP29590 882 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 OR1E1P30953 314 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 CSNK1EP49674 416 aaKnown RBP22■■□□□ 1.11
PPP4R1-228ENST00000584074 AFF3P51826 1226 aaKnown RBP22■■□□□ 1.11
PPP4R1-228ENST00000584074 GSCP56915 257 aaPredicted RBP22■■□□□ 1.11
PPP4R1-228ENST00000584074 KRT83P78385 493 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 ZNF252P-AS1Q0IIN9 211 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 C6orf118Q5T5N4 469 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 KIAA0895LQ68EN5 471 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 NCEH1Q6PIU2 408 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 C3orf20Q8ND61 904 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 CENPIQ92674 756 aaPredicted RBP22■■□□□ 1.11
PPP4R1-228ENST00000584074 ORAI3Q9BRQ5 295 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 C2orf49Q9BVC5 232 aaPredicted RBP22■■□□□ 1.11
PPP4R1-228ENST00000584074 SELENOOQ9BVL4 669 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 MAGEB5Q9BZ81 275 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 ZYG11BQ9C0D3 744 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 TM9SF3Q9HD45 589 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 ZNF212Q9UDV6 495 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 SARDHQ9UL12 918 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 HS3ST2Q9Y278 367 aa22■■□□□ 1.11
PPP4R1-228ENST00000584074 A0A1B0GVT2 93 aa21.99■■□□□ 1.11
PPP4R1-228ENST00000584074 K7ERQ8 282 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms