RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 SLC18A2Q05940 514 aa13.94□□□□□ -0.18
NDEL1-204ENST00000578172 CNGA3Q16281 694 aa13.94□□□□□ -0.18
NDEL1-204ENST00000578172 TEDDM1Q5T9Z0 273 aa13.94□□□□□ -0.18
NDEL1-204ENST00000578172 CYP4V2Q6ZWL3 525 aaPredicted RBP13.94□□□□□ -0.18
NDEL1-204ENST00000578172 TRPV6Q9H1D0 765 aa13.94□□□□□ -0.18
NDEL1-204ENST00000578172 DDX18Q9NVP1 670 aaKnown RBP13.94□□□□□ -0.18
NDEL1-204ENST00000578172 OR12D3Q9UGF7 316 aa13.94□□□□□ -0.18
NDEL1-204ENST00000578172 GREB1LQ9C091 1923 aaPredicted RBP13.94□□□□□ -0.18
NDEL1-204ENST00000578172 NCF1BA6NI72 391 aaPredicted RBP13.93□□□□□ -0.18
NDEL1-204ENST00000578172 NCF1CA8MVU1 366 aaPredicted RBP13.93□□□□□ -0.18
NDEL1-204ENST00000578172 NCF1P14598 390 aaPredicted RBP13.93□□□□□ -0.18
NDEL1-204ENST00000578172 GRM3Q14832 879 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 PDZD4Q76G19 769 aaPredicted RBP13.93□□□□□ -0.18
NDEL1-204ENST00000578172 PHC3Q8NDX5 983 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 URGCPQ8TCY9 931 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 HIC2Q96JB3 615 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 NMRAL1Q9HBL8 299 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 SARS2Q9NP81 518 aaKnown RBP13.93□□□□□ -0.18
NDEL1-204ENST00000578172 COPG2Q9UBF2 871 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 EFR3BQ9Y2G0 817 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 CRYL1Q9Y2S2 319 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 SCN1AP35498 2009 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 BCLAF3A2AJT9 711 aaKnown RBP13.93□□□□□ -0.18
NDEL1-204ENST00000578172 MDM4O15151 490 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 IDH3AP50213 366 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 CDH13P55290 713 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 KIF19Q2TAC6 998 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 SENP8Q96LD8 212 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 KLHL5Q96PQ7 755 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 PHF12Q96QT6 1004 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 SUDS3Q9H7L9 328 aaPredicted RBP13.93□□□□□ -0.18
NDEL1-204ENST00000578172 AURKCQ9UQB9 309 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 M0QZ92 97 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 ENDOD1O94919 500 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 SETSIPP0DME0 302 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 SMIM10L2AP0DMW4 78 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 SMIM10L2BP0DMW5 78 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 PGAM1P18669 254 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 MATKP42679 507 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 ARL13BQ3SXY8 428 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 ZNF470Q6ECI4 717 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 GPRIN1Q7Z2K8 1008 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 GPC2Q8N158 579 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 DCBLD1Q8N8Z6 715 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 SCAMP5Q8TAC9 235 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 MAPK15Q8TD08 544 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 VPS39Q96JC1 886 aa13.93□□□□□ -0.18
NDEL1-204ENST00000578172 ABI2Q9NYB9 513 aaPredicted RBP13.93□□□□□ -0.18
NDEL1-204ENST00000578172 UBA6A0AVT1 1052 aaPredicted RBP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 GRIK1P39086 918 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 GRIA4P48058 902 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 RALGDSQ12967 914 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 SNAPC2Q13487 334 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 NAPRTQ6XQN6 538 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 FASTKD5Q7L8L6 764 aaKnown RBP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 ZNF276Q8N554 614 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 ZNF560Q96MR9 790 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 GATA5Q9BWX5 397 aaPredicted RBP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 TRIM8Q9BZR9 551 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 LRRC40Q9H9A6 602 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 TLL2Q9Y6L7 1015 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 TRDMT1O14717 391 aaKnown RBP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 CRCPO75575 148 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 TM7SF2O76062 418 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 CRHR1P34998 444 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 CDC16Q13042 620 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 RPS6KA2Q15349 733 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 ZNF534Q76KX8 674 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 SLC45A3Q96JT2 553 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 FRMD8P1Q9BZ68 369 aaPredicted RBP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 ADARB2Q9NS39 739 aaKnown RBP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 XPR1Q9UBH6 696 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 DCDC2Q9UHG0 476 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 GJD2Q9UKL4 321 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 POLR2AP24928 1970 aaKnown RBP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 CNMDO75829 334 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 PROZP22891 400 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 NSUN2Q08J23 767 aaKnown RBP eCLIP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 PCLAFQ15004 111 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 ACAP1Q15027 740 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 TRMT5Q32P41 509 aaKnown RBP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 SCIMPQ6UWF3 145 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 CHSY1Q86X52 802 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 MYLK4Q86YV6 388 aaPredicted RBP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 DNAI2Q9GZS0 605 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 ILKAPQ9H0C8 392 aaPredicted RBP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 AP5M1Q9H0R1 490 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 SLC2A6Q9UGQ3 507 aa13.92□□□□□ -0.18
NDEL1-204ENST00000578172 CORO1CQ9ULV4 474 aaPredicted RBP13.92□□□□□ -0.18
NDEL1-204ENST00000578172 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
NDEL1-204ENST00000578172 NPR3P17342 541 aa13.91□□□□□ -0.18
NDEL1-204ENST00000578172 HSF5Q4G112 596 aaPredicted RBP13.91□□□□□ -0.18
NDEL1-204ENST00000578172 ARL13AQ5H913 290 aaPredicted RBP13.91□□□□□ -0.18
NDEL1-204ENST00000578172 ESRP1Q6NXG1 681 aaKnown RBP13.91□□□□□ -0.18
NDEL1-204ENST00000578172 CXCL17Q6UXB2 119 aa13.91□□□□□ -0.18
NDEL1-204ENST00000578172 TRIM67Q6ZTA4 783 aa13.91□□□□□ -0.18
NDEL1-204ENST00000578172 ACAD11Q709F0 780 aa13.91□□□□□ -0.18
NDEL1-204ENST00000578172 TMC7Q7Z402 723 aa13.91□□□□□ -0.18
NDEL1-204ENST00000578172 CMTM5Q96DZ9 223 aa13.91□□□□□ -0.18
NDEL1-204ENST00000578172 ECSITQ9BQ95 431 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms