RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TAOK1Q7L7X3 1001 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 CAND1Q86VP6 1230 aaKnown RBP14.1□□□□□ -0.15
TPM1-215ENST00000558868 TDRPQ86YL5 185 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 ANKMY2Q8IV38 441 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 LGI2Q8N0V4 545 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 NETO2Q8NC67 525 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 POF1BQ8WVV4 589 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 TLCD1Q96CP7 247 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 IL12RB2Q99665 862 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 NAT9Q9BTE0 207 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 ALG13Q9NP73 1137 aaKnown RBP14.1□□□□□ -0.15
TPM1-215ENST00000558868 DPP7Q9UHL4 492 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 IPO11Q9UI26 975 aaKnown RBP14.1□□□□□ -0.15
TPM1-215ENST00000558868 SLC24A2Q9UI40 661 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 NOVA2Q9UNW9 492 aaKnown RBP14.1□□□□□ -0.15
TPM1-215ENST00000558868 AAR2Q9Y312 384 aaKnown RBP14.1□□□□□ -0.15
TPM1-215ENST00000558868 SMIM23A6NLE4 172 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 RASA4BC9J798 803 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 ZBTB24O43167 697 aaPredicted RBP14.09□□□□□ -0.15
TPM1-215ENST00000558868 RASA4O43374 803 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 RAMP2O60895 175 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 ANXA9O76027 345 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 SUN1O94901 812 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 AP2A1O95782 977 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 SPATA31D3P0C874 917 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 CORO1AP31146 461 aaKnown RBP14.09□□□□□ -0.15
TPM1-215ENST00000558868 STX2P32856 288 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 IFNAR2P48551 515 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 RENBPP51606 427 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 CDH4P55283 916 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 ERVFC1P60507 584 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 RASA2Q15283 850 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 HP1BP3Q5SSJ5 553 aaPredicted RBP14.09□□□□□ -0.15
TPM1-215ENST00000558868 ADGRF1Q5T601 910 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 PLPP4Q5VZY2 271 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 NADSYN1Q6IA69 706 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 SPATA31D4Q6ZUB0 917 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 C3orf62Q6ZUJ4 267 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 TFAP2DQ7Z6R9 452 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 LINC00523Q86TU6 105 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 DENND1CQ8IV53 801 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 CNPY4Q8N129 248 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 PDCD7Q8N8D1 485 aaKnown RBP14.09□□□□□ -0.15
TPM1-215ENST00000558868 MICAL1Q8TDZ2 1067 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 EPS8L3Q8TE67 593 aaKnown RBP14.09□□□□□ -0.15
TPM1-215ENST00000558868 DEPDC1BQ8WUY9 529 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 MAML1Q92585 1016 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 DPF3Q92784 378 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 IGSF8Q969P0 613 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 AGAP3Q96P47 875 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 CNOT10Q9H9A5 744 aaKnown RBP14.09□□□□□ -0.15
TPM1-215ENST00000558868 LRRC40Q9H9A6 602 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 IL21Q9HBE4 155 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 TRPC7Q9HCX4 862 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 ZNF334Q9HCZ1 680 aaPredicted RBP14.09□□□□□ -0.15
TPM1-215ENST00000558868 PSD3Q9NYI0 1048 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 ZC3H7BQ9UGR2 993 aaKnown RBP14.09□□□□□ -0.15
TPM1-215ENST00000558868 LGALS13Q9UHV8 139 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 LSM7Q9UK45 103 aaKnown RBP14.09□□□□□ -0.15
TPM1-215ENST00000558868 CHMP2BQ9UQN3 213 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 ZNF510Q9Y2H8 683 aa14.09□□□□□ -0.15
TPM1-215ENST00000558868 PLXNA4Q9HCM2 1894 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 C2orf78A6NCI8 922 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 SDR42E2A6NKP2 422 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 SOX1O00570 391 aaPredicted RBP14.08□□□□□ -0.16
TPM1-215ENST00000558868 TRDMT1O14717 391 aaKnown RBP14.08□□□□□ -0.16
TPM1-215ENST00000558868 CACNG3O60359 315 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 CLDN11O75508 207 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 CNTN5O94779 1100 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 OLFM2O95897 454 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 HDCP19113 662 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 GABRR2P28476 465 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 OR1E1P30953 314 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 GPX6P59796 221 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 MAGOHP61326 146 aaKnown RBP14.08□□□□□ -0.16
TPM1-215ENST00000558868 SKOR1P84550 965 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 IL10RBQ08334 325 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 ZBTB17Q13105 803 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 HNRNPDQ14103 355 aaKnown RBP14.08□□□□□ -0.16
TPM1-215ENST00000558868 POLD3Q15054 466 aaPredicted RBP14.08□□□□□ -0.16
TPM1-215ENST00000558868 LONRF1Q17RB8 773 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 ALFQ53S48 1182 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 UBAP2Q5T6F2 1119 aaKnown RBP14.08□□□□□ -0.16
TPM1-215ENST00000558868 CHST9Q7L1S5 443 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 TMEM150AQ86TG1 271 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 SH2D3CQ8N5H7 860 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 LEMD2Q8NC56 503 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 FCRL5Q96RD9 977 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 CYTH2Q99418 400 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 EBNA1BP2Q99848 306 aaKnown RBP14.08□□□□□ -0.16
TPM1-215ENST00000558868 CEP41Q9BYV8 373 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 RNF38Q9H0F5 515 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 MAGEH1Q9H213 219 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 ACSS3Q9H6R3 686 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 SP110Q9HB58 689 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 GLOD4Q9HC38 313 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 ASAH2Q9NR71 780 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 STOML2Q9UJZ1 356 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 NR2E3Q9Y5X4 410 aa14.08□□□□□ -0.16
TPM1-215ENST00000558868 TRAV19A0A0A6YYK7 116 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms