RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 CELF6Q96J87 481 aaKnown RBP11.89□□□□□ -0.51
YBX3-213ENST00000542641 LMLNQ96KR4 655 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 C16orf45Q96MC5 204 aaPredicted RBP11.89□□□□□ -0.51
YBX3-213ENST00000542641 NAPGQ99747 312 aaPredicted RBP11.89□□□□□ -0.51
YBX3-213ENST00000542641 FEM1AQ9BSK4 669 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 SPON2Q9BUD6 331 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 MAGEH1Q9H213 219 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 VPS28Q9UK41 221 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 EFR3BQ9Y2G0 817 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 MFHAS1Q9Y4C4 1052 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 TICRRQ7Z2Z1 1910 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 SHISA7A6NL88 538 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 RASA4BC9J798 803 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 DFFAO00273 331 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 RASA4O43374 803 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 TJP3O95049 919 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 POLR2EP19388 210 aaKnown RBP11.88□□□□□ -0.51
YBX3-213ENST00000542641 DRD1P21728 446 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 CASQ1P31415 396 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 PTPN7P35236 360 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 ETFBP38117 255 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 PLK1P53350 603 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 YBEYP58557 167 aaPredicted RBP11.88□□□□□ -0.51
YBX3-213ENST00000542641 STARD6P59095 220 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 ADCY2Q08462 1091 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 DMC1Q14565 340 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 PAFAH1B3Q15102 231 aaKnown RBP11.88□□□□□ -0.51
YBX3-213ENST00000542641 PARP15Q460N3 678 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 FUT11Q495W5 492 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 PITRM1Q5JRX3 1037 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 CCDC181Q5TID7 509 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 IL31Q6EBC2 164 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 SYT10Q6XYQ8 523 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 KIAA0907Q7Z7F0 614 aaPredicted RBP11.88□□□□□ -0.51
YBX3-213ENST00000542641 ADIPOR2Q86V24 386 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 ZNF354CQ86Y25 554 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 APCDD1Q8J025 514 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 PLD5Q8N7P1 536 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 OR7D4Q8NG98 312 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 WFIKKN2Q8TEU8 576 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 PBKQ96KB5 322 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 OSBPL9Q96SU4 736 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 CIPCQ9C0C6 399 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 SLC39A8Q9C0K1 460 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 KLC2Q9H0B6 622 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 NOL6Q9H6R4 1146 aaKnown RBP11.88□□□□□ -0.51
YBX3-213ENST00000542641 SNX12Q9UMY4 172 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 NDRG2Q9UN36 371 aaKnown RBP11.88□□□□□ -0.51
YBX3-213ENST00000542641 MRPS17Q9Y2R5 130 aaKnown RBP11.88□□□□□ -0.51
YBX3-213ENST00000542641 HEY1Q9Y5J3 304 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 OR51B4Q9Y5P0 310 aa11.88□□□□□ -0.51
YBX3-213ENST00000542641 MYOFQ9NZM1 2061 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 A0A0C4DFX4 3053 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 A0A0A0MRY4 1105 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 ARHGAP42A6NI28 874 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 PRRT4C9JH25 899 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 CBX4O00257 560 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 SNPHO15079 494 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 TIMM44O43615 452 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 CEP104O60308 925 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 EGFP01133 1207 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 ATP5BP06576 529 aaKnown RBP11.87□□□□□ -0.51
YBX3-213ENST00000542641 ALADP13716 330 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 TGM2P21980 687 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 ACVRL1P37023 503 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 TNFRSF4P43489 277 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 NR2C2P49116 596 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 PAPOLAP51003 745 aaKnown RBP11.87□□□□□ -0.51
YBX3-213ENST00000542641 GBE1Q04446 702 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 SIGLEC14Q08ET2 396 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 PLEKHG6Q3KR16 790 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 PAPD7Q5XG87 772 aaKnown RBP11.87□□□□□ -0.51
YBX3-213ENST00000542641 AFMIDQ63HM1 303 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 TMEM215Q68D42 235 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 MBLAC2Q68D91 279 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 FSTL4Q6MZW2 842 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 NPNTQ6UXI9 565 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 BBS12Q6ZW61 710 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 SFTPA1Q8IWL2 248 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 ARHGAP12Q8IWW6 846 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 TP53INP2Q8IXH6 220 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 NETO2Q8NC67 525 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 P3H4Q92791 437 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 ARHGEF2Q92974 986 aaKnown RBP11.87□□□□□ -0.51
YBX3-213ENST00000542641 ALG14Q96F25 216 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 HMCESQ96FZ2 354 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 NELL2Q99435 816 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 HERPUD2Q9BSE4 406 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 C2orf49Q9BVC5 232 aaPredicted RBP11.87□□□□□ -0.51
YBX3-213ENST00000542641 LRRC19Q9H756 370 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 ATP13A1Q9HD20 1204 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 ELOVL2Q9NXB9 296 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 SAE1Q9UBE0 346 aaPredicted RBP11.87□□□□□ -0.51
YBX3-213ENST00000542641 INTS6Q9UL03 887 aaKnown RBP11.87□□□□□ -0.51
YBX3-213ENST00000542641 HPCAL4Q9UM19 191 aa11.87□□□□□ -0.51
YBX3-213ENST00000542641 KANSL1LA0AUZ9 987 aa11.86□□□□□ -0.51
YBX3-213ENST00000542641 K7EQS6 105 aa11.86□□□□□ -0.51
YBX3-213ENST00000542641 KIF2AO00139 706 aaPredicted RBP11.86□□□□□ -0.51
YBX3-213ENST00000542641 KDELR3O43731 214 aa11.86□□□□□ -0.51
YBX3-213ENST00000542641 MFSD11O43934 449 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms