RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 PRSS55Q6UWB4 352 aaPredicted RBP26.44■■□□□ 1.82
COL13A1-214ENST00000522165 DEFB128Q7Z7B8 93 aa26.44■■□□□ 1.82
COL13A1-214ENST00000522165 ZNF683Q8IZ20 524 aa26.44■■□□□ 1.82
COL13A1-214ENST00000522165 CDKL2Q92772 493 aa26.44■■□□□ 1.82
COL13A1-214ENST00000522165 LRRC40Q9H9A6 602 aa26.44■■□□□ 1.82
COL13A1-214ENST00000522165 MATN3O15232 486 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 MAGEA9P43362 315 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 LIG3P49916 1009 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 DUSP4Q13115 394 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 NAB1Q13506 487 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 TRIP4Q15650 581 aaPredicted RBP26.43■■□□□ 1.82
COL13A1-214ENST00000522165 LACTB2Q53H82 288 aaPredicted RBP26.43■■□□□ 1.82
COL13A1-214ENST00000522165 SPANXN3Q5MJ09 141 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 OTOP3Q7RTS5 596 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 DNAAF3Q8N9W5 541 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 IL12RB2Q99665 862 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 SLCO1B3Q9NPD5 702 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 PHTF1Q9UMS5 762 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 ARL2BPQ9Y2Y0 163 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 STARD13Q9Y3M8 1113 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 MRPL42Q9Y6G3 142 aaKnown RBP26.43■■□□□ 1.82
COL13A1-214ENST00000522165 RPS6KL1Q9Y6S9 549 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 GREB1Q4ZG55 1949 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 COPEO14579 308 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 CNTFP26441 200 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 SPRED3Q2MJR0 410 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 FNIP2Q9P278 1114 aa26.43■■□□□ 1.82
COL13A1-214ENST00000522165 EDF1O60869 148 aaKnown RBP26.42■■□□□ 1.82
COL13A1-214ENST00000522165 RPL10AP62906 217 aaKnown RBP26.42■■□□□ 1.82
COL13A1-214ENST00000522165 MS4A13Q5J8X5 152 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 MROH9Q5TGP6 573 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 ZNF449Q6P9G9 518 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 TRPM8Q7Z2W7 1104 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 FAM111AQ96PZ2 611 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 SRPK1Q96SB4 655 aaKnown RBP26.42■■□□□ 1.82
COL13A1-214ENST00000522165 PRDM5Q9NQX1 630 aaPredicted RBP26.42■■□□□ 1.82
COL13A1-214ENST00000522165 MKS1Q9NXB0 559 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 CDY1Q9Y6F8 540 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 PSMD3O43242 534 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 EFEMP2O95967 443 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 NPY2RP49146 381 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 TLE2Q04725 743 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 C10orf120Q5SQS8 335 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 CES3Q6UWW8 571 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.42■■□□□ 1.82
COL13A1-214ENST00000522165 TIFABQ6ZNK6 161 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 LRRC49Q8IUZ0 686 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 ATP6V0D2Q8N8Y2 350 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 ZNF419Q96HQ0 510 aaPredicted RBP26.42■■□□□ 1.82
COL13A1-214ENST00000522165 FCRL3Q96P31 734 aaPredicted RBP26.42■■□□□ 1.82
COL13A1-214ENST00000522165 UBP1Q9NZI7 540 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 MARCH2Q9P0N8 246 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 SLC17A6Q9P2U8 582 aa26.42■■□□□ 1.82
COL13A1-214ENST00000522165 WDR91A4D1P6 747 aa26.41■■□□□ 1.82
COL13A1-214ENST00000522165 MNX1P50219 401 aaPredicted RBP26.41■■□□□ 1.82
COL13A1-214ENST00000522165 MGAT5Q09328 741 aa26.41■■□□□ 1.82
COL13A1-214ENST00000522165 PSMD5Q16401 504 aa26.41■■□□□ 1.82
COL13A1-214ENST00000522165 PACS1Q6VY07 963 aa26.41■■□□□ 1.82
COL13A1-214ENST00000522165 TMEM135Q86UB9 458 aa26.41■■□□□ 1.82
COL13A1-214ENST00000522165 MIB1Q86YT6 1006 aa26.41■■□□□ 1.82
COL13A1-214ENST00000522165 FBXO22Q8NEZ5 403 aa26.41■■□□□ 1.82
COL13A1-214ENST00000522165 BTN2A3PQ96KV6 586 aa26.41■■□□□ 1.82
COL13A1-214ENST00000522165 PLCD4Q9BRC7 762 aa26.41■■□□□ 1.82
COL13A1-214ENST00000522165 PPARGC1AQ9UBK2 798 aaKnown RBP26.41■■□□□ 1.82
COL13A1-214ENST00000522165 MICAL3Q7RTP6 2002 aa26.41■■□□□ 1.82
COL13A1-214ENST00000522165 UPP2O95045 317 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 FSBPO95073 299 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 ALDH7A1P49419 539 aaKnown RBP26.4■■□□□ 1.82
COL13A1-214ENST00000522165 PAPOLAP51003 745 aaKnown RBP26.4■■□□□ 1.82
COL13A1-214ENST00000522165 TRIM60Q495X7 471 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 CERCAMQ5T4B2 595 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 NAPEPLDQ6IQ20 393 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 TIGD7Q6NT04 549 aaPredicted RBP26.4■■□□□ 1.82
COL13A1-214ENST00000522165 CDHR3Q6ZTQ4 885 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 CHSY1Q86X52 802 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 CERS2Q96G23 380 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 TOX2Q96NM4 488 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 FCRL5Q96RD9 977 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 APOL2Q9BQE5 337 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 NOL6Q9H6R4 1146 aaKnown RBP26.4■■□□□ 1.82
COL13A1-214ENST00000522165 GLOD4Q9HC38 313 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 NYNRINQ9P2P1 1898 aaKnown RBP26.4■■□□□ 1.82
COL13A1-214ENST00000522165 ADAM12O43184 909 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 ZDHHC11BP0C7U3 371 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 RHOQP17081 205 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 UMODL1-AS1Q8N2C9 162 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 CCDC63Q8NA47 563 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 GIPC2Q8TF65 315 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 ZYG11BQ9C0D3 744 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 IQCGQ9H095 443 aaKnown RBP26.4■■□□□ 1.82
COL13A1-214ENST00000522165 ACTR5Q9H9F9 607 aaPredicted RBP26.4■■□□□ 1.82
COL13A1-214ENST00000522165 ABCF3Q9NUQ8 709 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 MTRRQ9UBK8 725 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 AAR2Q9Y312 384 aaKnown RBP26.4■■□□□ 1.82
COL13A1-214ENST00000522165 PLLPQ9Y342 182 aa26.4■■□□□ 1.82
COL13A1-214ENST00000522165 SLC38A8A6NNN8 435 aa26.39■■□□□ 1.82
COL13A1-214ENST00000522165 USP1O94782 785 aa26.39■■□□□ 1.82
COL13A1-214ENST00000522165 IGLV3-27P01718 113 aa26.39■■□□□ 1.82
COL13A1-214ENST00000522165 ATF6P18850 670 aa26.39■■□□□ 1.82
COL13A1-214ENST00000522165 ACTN3Q08043 901 aaPredicted RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms