RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FAM214AQ32MH5 1076 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 CTXN3Q4LDR2 81 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 ZNF280DQ6N043 979 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 TMCO2Q7Z6W1 182 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 CLNKQ7Z7G1 428 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 CPOQ8IVL8 374 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 SLC15A3Q8IY34 581 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 RNF169Q8NCN4 708 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 NOC3LQ8WTT2 800 aaKnown RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 FAM151AQ8WW52 585 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 DACT3Q96B18 629 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 MIEF2Q96C03 454 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 FAM84AQ96KN4 292 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 COG8Q96MW5 612 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 DCLRE1CQ96SD1 692 aaKnown RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 OSBPL5Q9H0X9 879 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 TRIM36Q9NQ86 728 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 TMEM160Q9NX00 188 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 POLG2Q9UHN1 485 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 BAG5Q9UL15 447 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 USP22Q9UPT9 525 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 FANCMQ8IYD8 2048 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 GOLGA6L6A8MZA4 724 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 J3KTA2 159 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 MATN2O00339 956 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 TOR1BO14657 336 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 FFAR3O14843 346 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 SLC30A4O14863 429 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 DCLK1O15075 740 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 FIBPO43427 364 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 TRIM13O60858 407 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 GUCY1B2O75343 617 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 STC2O76061 302 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 CNPP09543 421 aaKnown RBP5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 FCER1AP12319 257 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 PLA2G2AP14555 144 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 HK1P19367 917 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 RPS6KB1P23443 525 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 SLC6A2P23975 617 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 RBL1P28749 1068 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 SERPINA4P29622 427 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 AKT1P31749 480 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 LIFRP42702 1097 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 ANXA11P50995 505 aaKnown RBP5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 PGDP52209 483 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 CHN2P52757 468 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 LILRA4P59901 499 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 SLFN5Q08AF3 891 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 MYO1EQ12965 1108 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 SSPNQ14714 243 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 TAF7Q15545 349 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 SMAD1Q15797 465 aaKnown RBP5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 NOMO2Q5JPE7 1267 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 ZNF569Q5MCW4 686 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 TTC22Q5TAA0 569 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 FKBP1CQ5VVH2 108 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 ICE2Q659A1 982 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 SLFN13Q68D06 897 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 ABLIM2Q6H8Q1 611 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 ARMC6Q6NXE6 501 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 TAF2Q6P1X5 1199 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 TBC1D1Q86TI0 1168 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 RAB11FIP4Q86YS3 637 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 GSPT2Q8IYD1 628 aaKnown RBP5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 GPR135Q8IZ08 494 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 CEP70Q8NHQ1 597 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 SCAMP5Q8TAC9 235 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 HVCN1Q96D96 273 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 NEUROD6Q96NK8 337 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 HIST1H2AAQ96QV6 131 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 TWNKQ96RR1 684 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 MPHOSPH8Q99549 860 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 SLC38A3Q99624 504 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 DPYSL5Q9BPU6 564 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 VPS45Q9NRW7 570 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 BLOC1S4Q9NUP1 217 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 LIN7CQ9NUP9 197 aaKnown RBP5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 NSMCE4AQ9NXX6 385 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 LPAR3Q9UBY5 353 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 NRBP1Q9UHY1 535 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 SUFUQ9UMX1 484 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 ELP1O95163 1332 aa5.16□□□□□ -1.58
HMGB1P23-201ENST00000518743 DMXL2Q8TDJ6 3036 aa5.15□□□□□ -1.58
HMGB1P23-201ENST00000518743 UBR5O95071 2799 aaPredicted RBP5.15□□□□□ -1.58
HMGB1P23-201ENST00000518743 RALGAPA1Q6GYQ0 2036 aa5.15□□□□□ -1.58
HMGB1P23-201ENST00000518743 DYTNA2CJ06 578 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 LINC01553A4QN01 128 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 E7EVH7 732 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 TBX10O75333 385 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 PRB1P04280 392 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 HOXC6P09630 235 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 TNNT1P13805 278 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 RXRAP19793 462 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 CHMP24386 653 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 ADORA2AP29274 412 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 PSMC2P35998 433 aaKnown RBP5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 PDE6CP51160 858 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 PNLIPRP1P54315 467 aa5.15□□□□□ -1.59
HMGB1P23-201ENST00000518743 PRKAA2P54646 552 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms