RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ZNF202O95125 648 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 VAV1P15498 845 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 ACADSBP45954 432 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 NUMBP49757 651 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 OXCT1P55809 520 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 PCBP4P57723 403 aaKnown RBP14.69□□□□□ -0.06
VARS-228ENST00000495010 KCNH2Q12809 1159 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 POM121L1PQ3SYA9 428 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 ZC3H12AQ5D1E8 599 aaKnown RBP14.69□□□□□ -0.06
VARS-228ENST00000495010 RABGAP1LQ5R372 815 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 KANSL1Q7Z3B3 1105 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 TAC4Q86UU9 113 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 TRIM69Q86WT6 500 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 ERICH1Q86X53 443 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 LSMEM2Q8N112 164 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 RNF34Q969K3 372 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 XPO7Q9UIA9 1087 aaKnown RBP14.69□□□□□ -0.06
VARS-228ENST00000495010 RNF225M0QZC1 329 aaPredicted RBP14.68□□□□□ -0.06
VARS-228ENST00000495010 TRIM38O00635 465 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 BNIP3LO60238 219 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 RNGTTO60942 597 aaKnown RBP14.68□□□□□ -0.06
VARS-228ENST00000495010 FYNP06241 537 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 ALPPL2P10696 532 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 PRCPP42785 496 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 FMO5P49326 533 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 UCNP55089 124 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 TMPRSS3P57727 454 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 RHDQ02161 417 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 CNTN1Q12860 1018 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 TTC39BQ5VTQ0 682 aaPredicted RBP14.68□□□□□ -0.06
VARS-228ENST00000495010 SYPL2Q5VXT5 272 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 ANKRD40Q6AI12 368 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 TMC6Q7Z403 805 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 CCAR2Q8N163 923 aaKnown RBP14.68□□□□□ -0.06
VARS-228ENST00000495010 SLC35C1Q96A29 364 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 ZNF578Q96N58 590 aaPredicted RBP14.68□□□□□ -0.06
VARS-228ENST00000495010 DEPDC7Q96QD5 511 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 ZSWIM1Q9BR11 485 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 METTL14Q9HCE5 456 aaKnown RBP14.68□□□□□ -0.06
VARS-228ENST00000495010 EVA1BQ9NVM1 165 aa14.68□□□□□ -0.06
VARS-228ENST00000495010 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.68□□□□□ -0.06
VARS-228ENST00000495010 FARP1Q9Y4F1 1045 aaPredicted RBP14.68□□□□□ -0.06
VARS-228ENST00000495010 A0A1W2PQ27 194 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 A0A1W2PQ64 194 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 KCNU1A8MYU2 1149 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 J3QKU1 62 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 FFAR2O15552 330 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 TRUB2O95900 331 aaKnown RBP14.67□□□□□ -0.06
VARS-228ENST00000495010 CALCAP01258 141 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 THEGLP0DJG4 465 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 DGKAP23743 735 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 METAP1P53582 386 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 CCDC15Q0P6D6 951 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 ZNF658Q5TYW1 1059 aaPredicted RBP14.67□□□□□ -0.06
VARS-228ENST00000495010 BEND5Q7L4P6 421 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 OR4C6Q8NH72 309 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 FRS2Q8WU20 508 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 ERCC4Q92889 916 aaPredicted RBP14.67□□□□□ -0.06
VARS-228ENST00000495010 MYOCQ99972 504 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 ABCG4Q9H172 646 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 POPDC2Q9HBU9 364 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 PREBQ9HCU5 417 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 SARDHQ9UL12 918 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 CA5BQ9Y2D0 317 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 PCDHB1Q9Y5F3 818 aa14.67□□□□□ -0.06
VARS-228ENST00000495010 NYNRINQ9P2P1 1898 aaKnown RBP14.67□□□□□ -0.06
VARS-228ENST00000495010 A0A1B0GVM2 712 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 TCAF2A6NFQ2 919 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 ALOX15BO15296 676 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 SLC31A1O15431 190 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 MPOP05164 745 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 SLC2A3P11169 496 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 DUSP3P51452 185 aaPredicted RBP14.66□□□□□ -0.06
VARS-228ENST00000495010 PLK1P53350 603 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 YWHAZP63104 245 aaKnown RBP14.66□□□□□ -0.06
VARS-228ENST00000495010 GABREP78334 506 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 LRRC63Q05C16 580 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 KCNMA1Q12791 1236 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 PNOCQ13519 176 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 DLG2Q15700 870 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 CCDC40Q4G0X9 1142 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 ARHGAP40Q5TG30 622 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 AGBL4Q5VU57 503 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 RRAGAQ7L523 313 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 CIR1Q86X95 450 aaPredicted RBP14.66□□□□□ -0.06
VARS-228ENST00000495010 SLC25A45Q8N413 288 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 KCNE4Q8WWG9 221 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 KAT5Q92993 513 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 FAM131CQ96AQ9 280 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 CCDC114Q96M63 670 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 MED15Q96RN5 788 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 CALN1Q9BXU9 219 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 SCAND2PQ9GZW5 306 aaPredicted RBP14.66□□□□□ -0.06
VARS-228ENST00000495010 GOLPH3LQ9H4A5 285 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 FAM204AQ9H8W3 233 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 DYRK4Q9NR20 520 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 KLHL11Q9NVR0 708 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 PPM1HQ9ULR3 514 aa14.66□□□□□ -0.06
VARS-228ENST00000495010 HELZ2Q9BYK8 2649 aaKnown RBP14.66□□□□□ -0.06
VARS-228ENST00000495010 SETXQ7Z333 2677 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms