RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ADGRA2Q96PE1 1338 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 RUSC2Q8N2Y8 1516 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 A0A1W2PQM1 296 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 C16orf96A6NNT2 1141 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 PTGES3LE9PB15 166 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 PER2O15055 1255 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 TGFB1I1O43294 461 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 CCNT1O60563 726 aaKnown RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 SEC14L2O76054 403 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 NDUFA10O95299 355 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 PGM3O95394 542 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 URODP06132 367 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 ADRB2P07550 413 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 SPARCP09486 303 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 NR2F1P10589 423 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 CDH2P19022 906 aaPredicted RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 CTGFP29279 349 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 HADHAP40939 763 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 RPS6KA3P51812 740 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 TERF1P54274 439 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 SNX16P57768 344 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 UFM1P61960 85 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 RAE1P78406 368 aaKnown RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 ARHGAP8P85298 464 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 E2F1Q01094 437 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 ALKBH1Q13686 389 aaKnown RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 SF3B3Q15393 1217 aaKnown RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 GXYLT1Q4G148 440 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 SLC39A5Q6ZMH5 540 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 RRM2BQ7LG56 351 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 GALNT7Q86SF2 657 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 SCN4BQ8IWT1 228 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 CNTROBQ8N137 903 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 CCDC191Q8NCU4 936 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 CPEB3Q8NE35 698 aaKnown RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 RP9Q8TA86 221 aaKnown RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 SCFD2Q8WU76 684 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 RAB40AQ8WXH6 277 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 NCSTNQ92542 709 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 NELL1Q92832 810 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 CAVIN3Q969G5 261 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 KLHL29Q96CT2 875 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 CALML4Q96GE6 196 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 PRR11Q96HE9 360 aaPredicted RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 PGBD1Q96JS3 809 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 PBKQ96KB5 322 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 ZMAT2Q96NC0 199 aaKnown RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 PIP5K1AQ99755 562 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 CLSTN3Q9BQT9 956 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 EPHX3Q9H6B9 360 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 TTC12Q9H892 705 aaPredicted RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 KLC4Q9NSK0 619 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 ABHD10Q9NUJ1 306 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 MTMR4Q9NYA4 1195 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 MGAT4CQ9UBM8 478 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 DKK2Q9UBU2 259 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 KLQ9UEF7 1012 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 LIMA1Q9UHB6 759 aaKnown RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 RPS6KA6Q9UK32 745 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 ZNF215Q9UL58 517 aaPredicted RBP4.87□□□□□ -1.63
VPS13A-211ENST00000484581 PCDHGB4Q9UN71 923 aa4.87□□□□□ -1.63
VPS13A-211ENST00000484581 WDR27A2RRH5 827 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 TMEM200CA6NKL6 621 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 CES2O00748 559 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 GJB3O75712 270 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 MBPP02686 304 aaPredicted RBP4.86□□□□□ -1.63
VPS13A-211ENST00000484581 VDRP11473 427 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 CYP4B1P13584 511 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 PRPH2P23942 346 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 NFKBIAP25963 317 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 ZFP36P26651 326 aaKnown RBP4.86□□□□□ -1.63
VPS13A-211ENST00000484581 AVPR2P30518 371 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 ICAM3P32942 547 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 ACSL1P33121 698 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 MTNR1AP48039 350 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 JAK3P52333 1124 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 C21orf58P58505 322 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 IFI35P80217 286 aaPredicted RBP4.86□□□□□ -1.63
VPS13A-211ENST00000484581 EFNB1P98172 346 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 B4GALNT1Q00973 533 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 ROR1Q01973 937 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 BYSLQ13895 437 aaKnown RBP4.86□□□□□ -1.63
VPS13A-211ENST00000484581 GPR162Q16538 588 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 ERCC6LQ2NKX8 1250 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 VWA1Q6PCB0 445 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 GJB7Q6PEY0 223 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 NCEH1Q6PIU2 408 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 Q6YL49 198 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 ARHGEF19Q8IW93 802 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 LAS2Q8IYD9 372 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 LNX2Q8N448 690 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 ADPRHL1Q8NDY3 354 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 SRFBP1Q8NEF9 429 aaKnown RBP4.86□□□□□ -1.63
VPS13A-211ENST00000484581 KCNJ9Q92806 393 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 PERPQ96FX8 193 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 LBHD1Q9BQE6 289 aaPredicted RBP4.86□□□□□ -1.63
VPS13A-211ENST00000484581 MXD3Q9BW11 206 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 NPLQ9BXD5 320 aaPredicted RBP4.86□□□□□ -1.63
VPS13A-211ENST00000484581 RSPH9Q9H1X1 276 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms