RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, human

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRAT1-205	ENST00000473879	PNKP	Q96T60	521 aa		13.64	□□□□□ -0.23
BRAT1-205	ENST00000473879	AP1M1	Q9BXS5	423 aa		13.64	□□□□□ -0.23
BRAT1-205	ENST00000473879	DCLK3	Q9C098	648 aa		13.64	□□□□□ -0.23
BRAT1-205	ENST00000473879	TMPRSS4	Q9NRS4	437 aa		13.64	□□□□□ -0.23
BRAT1-205	ENST00000473879	C2orf42	Q9NWW7	574 aa		13.64	□□□□□ -0.23
BRAT1-205	ENST00000473879	MARK1	Q9P0L2	795 aa		13.64	□□□□□ -0.23
BRAT1-205	ENST00000473879	STIM2	Q9P246	746 aa		13.64	□□□□□ -0.23
BRAT1-205	ENST00000473879	OR12D3	Q9UGF7	316 aa		13.64	□□□□□ -0.23
BRAT1-205	ENST00000473879		K7EQS6	105 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	APOC4-APOC2	K7ER74	178 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	CST8	O60676	142 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	PHF2	O75151	1096 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	APOC2	P02655	101 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	GOT1	P17174	413 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	CHRNA3	P32297	505 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	MMRN1	Q13201	1228 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	LLGL1	Q15334	1064 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	CYP1B1	Q16678	543 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	PREPL	Q4J6C6	727 aa	Predicted RBP	13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	SLC9A4	Q6AI14	798 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	LRRC31	Q6UY01	552 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	RFX8	Q6ZV50	586 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	ANKS1B	Q7Z6G8	1248 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	C12orf40	Q86WS4	652 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	TMEM25	Q86YD3	366 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	PHTF2	Q8N3S3	785 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	MMGT1	Q8N4V1	131 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	MYRIP	Q8NFW9	859 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	RPLP0P6	Q8NHW5	317 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	AZIN2	Q96A70	460 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	TBC1D31	Q96DN5	1066 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	DDX50	Q9BQ39	737 aa	Known RBP	13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	SIK2	Q9H0K1	926 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	ANLN	Q9NQW6	1124 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	CWC15	Q9P013	229 aa	Known RBP	13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	HS3ST4	Q9Y661	456 aa		13.63	□□□□□ -0.23
BRAT1-205	ENST00000473879	TCRBV7S2A1N4T	A0A589	114 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879		I6L893	689 aa	Predicted RBP	13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	FGF10	O15520	208 aa	Predicted RBP	13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	ACSL4	O60488	711 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	KAT7	O95251	611 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	APOD	P05090	189 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	IL4R	P24394	825 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	CORO1A	P31146	461 aa	Known RBP	13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	SERPINB6	P35237	376 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	GRIA2	P42262	883 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	TNFRSF4	P43489	277 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	FNTA	P49354	379 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	DYNLT1	P63172	113 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	DPYS	Q14117	519 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	SIX1	Q15475	284 aa	Predicted RBP	13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	CCNG2	Q16589	344 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	ANO4	Q32M45	955 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	MS4A13	Q5J8X5	152 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	TEX35	Q5T0J7	233 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	ARTN	Q5T4W7	220 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	C8orf74	Q6P047	294 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	BZW1	Q7L1Q6	419 aa	Known RBP	13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	SYT13	Q7L8C5	426 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	LONP2	Q86WA8	852 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	CAMKK1	Q8N5S9	505 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	PRELID2	Q8N945	189 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	SUMF1	Q8NBK3	374 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	PCDH19	Q8TAB3	1148 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	USP33	Q8TEY7	942 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	MAGOHB	Q96A72	148 aa	Known RBP	13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	ACD	Q96AP0	544 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	HERPUD2	Q9BSE4	406 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	EPC1	Q9H2F5	836 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	LRRC19	Q9H756	370 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	CATSPERB	Q9H7T0	1116 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	ARHGEF4	Q9NR80	690 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	DONSON	Q9NYP3	566 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	SLC8A2	Q9UPR5	921 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	MYOF	Q9NZM1	2061 aa		13.62	□□□□□ -0.23
BRAT1-205	ENST00000473879	CCDC163	A0A0D9SF12	145 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879		E9PAM4	449 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879		F5H5T6	163 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	FAM72C	H0Y354	149 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	MCF2L	O15068	1137 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	CACNG3	O60359	315 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	TULP3	O75386	442 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	LRIG2	O94898	1065 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	PENK	P01210	267 aa	Predicted RBP	13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	EPHB2	P29323	1055 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	HOXC13	P31276	330 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	CNR2	P34972	360 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	CHKA	P35790	457 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	NR2C2	P49116	596 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	FNTB	P49356	437 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	MRPS21	P82921	87 aa	Known RBP	13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	DMWD	Q09019	674 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	MESP2	Q0VG99	397 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	GLE1	Q53GS7	698 aa	Known RBP	13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	FAM72A	Q5TYM5	149 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	PIK3R6	Q5UE93	754 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	MANEAL	Q5VSG8	457 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	FAM72D	Q6L9T8	149 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	TMCO3	Q6UWJ1	677 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	TPGS1	Q6ZTW0	290 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms