RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 SCAMP5Q8TAC9 235 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 DDI1Q8WTU0 396 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 KIFAP3Q92845 792 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 PCED1BQ96HM7 432 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 TSPAN18Q96SJ8 248 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 SYT15Q9BQS2 421 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 SLC2A11Q9BYW1 496 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 ASPSCR1Q9BZE9 553 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 TCEAL2Q9H3H9 227 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-206ENST00000471968 RDH14Q9HBH5 336 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 CRTAC1Q9NQ79 661 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 ABCB8Q9NUT2 735 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 SLC39A1Q9NY26 324 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 DPP3Q9NY33 737 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 ARHGAP28Q9P2N2 729 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 SPASTQ9UBP0 616 aa6.84□□□□□ -1.31
HDAC3-206ENST00000471968 ZBTB47Q9UFB7 747 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-206ENST00000471968 IPO11Q9UI26 975 aaKnown RBP6.84□□□□□ -1.31
HDAC3-206ENST00000471968 COPG1Q9Y678 874 aaKnown RBP6.84□□□□□ -1.31
HDAC3-206ENST00000471968 UNC13CQ8NB66 2214 aa6.84□□□□□ -1.32
HDAC3-206ENST00000471968 SPTY2D1-AS1A0A0U1RR47 76 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 FRMD3A2A2Y4 597 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 A6NNZ2 444 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 LMO7DNF2Z398 122 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 MDM4O15151 490 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 CCNT1O60563 726 aaKnown RBP6.83□□□□□ -1.32
HDAC3-206ENST00000471968 RTN3O95197 1032 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-206ENST00000471968 ATP5BP06576 529 aaKnown RBP6.83□□□□□ -1.32
HDAC3-206ENST00000471968 HNRNPA2B1P22626 353 aaKnown RBP6.83□□□□□ -1.32
HDAC3-206ENST00000471968 ADD1P35611 737 aaKnown RBP6.83□□□□□ -1.32
HDAC3-206ENST00000471968 CHKAP35790 457 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 LHX1P48742 406 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 PGFP49763 221 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 ST8SIA6P61647 398 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 KRT83P78385 493 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 FOXM1Q08050 763 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 STRN3Q13033 797 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 CHRNA6Q15825 494 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 HNRNPA1L2Q32P51 320 aaKnown RBP6.83□□□□□ -1.32
HDAC3-206ENST00000471968 PLEKHN1Q494U1 663 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-206ENST00000471968 DCAF12Q5T6F0 453 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 C9orf64Q5T6V5 341 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 ANKS6Q68DC2 871 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 ABI3BPQ7Z7G0 1075 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 DCP2Q8IU60 420 aaKnown RBP6.83□□□□□ -1.32
HDAC3-206ENST00000471968 ZNF808Q8N4W9 903 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-206ENST00000471968 WFIKKN2Q8TEU8 576 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 TMEM158Q8WZ71 300 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 ZNF560Q96MR9 790 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 TWSG1Q9GZX9 223 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 KMT5AQ9NQR1 393 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 TMEM30AQ9NV96 361 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 APOBEC3BQ9UH17 382 aaKnown RBP6.83□□□□□ -1.32
HDAC3-206ENST00000471968 BRPF3Q9ULD4 1205 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 NAALADL1Q9UQQ1 740 aa6.83□□□□□ -1.32
HDAC3-206ENST00000471968 HIVEP2P31629 2446 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 A0A1W2PQU0 124 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 INAFM1C9JVW0 142 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 HGSO14964 777 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-206ENST00000471968 FANCGO15287 622 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 SLC16A4O15374 487 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 PHACTR2O75167 634 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 KATNA1O75449 491 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 MAP3K6O95382 1288 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 BAG4O95429 457 aaKnown RBP6.82□□□□□ -1.32
HDAC3-206ENST00000471968 LY6G6DO95868 133 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 KLKB1P03952 638 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 ADRB2P07550 413 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 STSP08842 583 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 ZDHHC11BP0C7U3 371 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 PTPN1P18031 435 aaKnown RBP6.82□□□□□ -1.32
HDAC3-206ENST00000471968 POLR2EP19388 210 aaKnown RBP6.82□□□□□ -1.32
HDAC3-206ENST00000471968 LMO2P25791 158 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 CHMLP26374 656 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 ATP5C1P36542 298 aaKnown RBP6.82□□□□□ -1.32
HDAC3-206ENST00000471968 STAT1P42224 750 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 STAT5AP42229 794 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 KIR3DL1P43629 444 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 PPP2R2BQ00005 443 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 TCEA2Q15560 299 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 MAPRE1Q15691 268 aaKnown RBP6.82□□□□□ -1.32
HDAC3-206ENST00000471968 DCAF10Q5QP82 559 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 ANKRD45Q5TZF3 282 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 HS2ST1Q7LGA3 356 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 FAM129CQ86XR2 697 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 CD302Q8IX05 232 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 RHOT1Q8IXI2 618 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 STK40Q8N2I9 435 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 BTN2A2Q8WVV5 523 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 MYO19Q96H55 970 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 FAM129BQ96TA1 746 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 LRRC61Q9BV99 259 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 DCLK3Q9C098 648 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 ACSS2Q9NR19 701 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 AGPAT4Q9NRZ5 378 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 GGA2Q9UJY4 613 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 PCDHA4Q9UN74 947 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 DOLKQ9UPQ8 538 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 NTNG1Q9Y2I2 539 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 ZNF281Q9Y2X9 895 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms