RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 OR51B4Q9Y5P0 310 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 SNX10Q9Y5X0 201 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 ASCC3Q8N3C0 2202 aaKnown RBP13.66□□□□□ -0.22
CPSF4-210ENST00000469897 A0A1W2PR77 199 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 C10orf142B7Z368 130 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 BNIP3LO60238 219 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 RTN2O75298 545 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 CNTN5O94779 1100 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 DKK1O94907 266 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 ITGAVP06756 1048 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 ZNF18P17022 549 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 DRD3P35462 400 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 ADPRHP54922 357 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 SNX16P57768 344 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 KCNMA1Q12791 1236 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 SHBQ15464 509 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 POM121L1PQ3SYA9 428 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 DPY19L2P1Q6NXN4 242 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 FAM71AQ8IYT1 594 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 MDM1Q8TC05 714 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 CCDC86Q9H6F5 360 aaKnown RBP13.66□□□□□ -0.22
CPSF4-210ENST00000469897 PIGVQ9NUD9 493 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 VPS28Q9UK41 221 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 PPM1HQ9ULR3 514 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 ADAMTS9Q9P2N4 1935 aa13.66□□□□□ -0.22
CPSF4-210ENST00000469897 FAM149AA5PLN7 773 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 TLR4O00206 839 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 ATP9BO43861 1147 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 CLDN11O75508 207 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 DAB1O75553 588 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 ADCY5O95622 1261 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 MT-CO1P00395 513 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 PRKCSHP14314 528 aaPredicted RBP13.65□□□□□ -0.22
CPSF4-210ENST00000469897 MAT2AP31153 395 aaKnown RBP13.65□□□□□ -0.22
CPSF4-210ENST00000469897 BPIFB4P59827 614 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 PPP2CBP62714 309 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 PPP2CAP67775 309 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 BNIP3Q12983 259 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 DRAP1Q14919 205 aaPredicted RBP13.65□□□□□ -0.22
CPSF4-210ENST00000469897 MAN2A1Q16706 1144 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 FAM46CQ5VWP2 391 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 C19orf48Q6RUI8 117 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 SLC26A9Q7LBE3 791 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 ZNF397Q8NF99 534 aaPredicted RBP13.65□□□□□ -0.22
CPSF4-210ENST00000469897 OR8D1Q8WZ84 308 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 NPY6RQ99463 290 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 TUBGCP2Q9BSJ2 902 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 TKTL2Q9H0I9 626 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 MUC3BQ9H195 1237 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 GDF3Q9NR23 364 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 TMPRSS4Q9NRS4 437 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.65□□□□□ -0.22
CPSF4-210ENST00000469897 ARHGAP20Q9P2F6 1191 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 SLC25A13Q9UJS0 675 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 LHX6Q9UPM6 363 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 TBC1D30Q9Y2I9 924 aa13.65□□□□□ -0.22
CPSF4-210ENST00000469897 AKAP13Q12802 2813 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 TRABD2BA6NFA1 517 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 I6L893 689 aaPredicted RBP13.64□□□□□ -0.23
CPSF4-210ENST00000469897 K7ERQ8 282 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 CBX4O00257 560 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 MCF2LO15068 1137 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 LDOC1O95751 146 aaPredicted RBP13.64□□□□□ -0.23
CPSF4-210ENST00000469897 CYP11B1P15538 503 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 CXCR3P49682 368 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 SULT1E1P49888 294 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 VASPP50552 380 aaPredicted RBP13.64□□□□□ -0.23
CPSF4-210ENST00000469897 CDH4P55283 916 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 DEUP1Q05D60 604 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 CNTN1Q12860 1018 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 MTA1Q13330 715 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 RAPGEF1Q13905 1077 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 DPCR1Q3MIW9 517 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 C5orf22Q49AR2 442 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 ALFQ53S48 1182 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 C2CD6Q53TS8 623 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 MIIPQ5JXC2 388 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 OTUD1Q5VV17 481 aaPredicted RBP13.64□□□□□ -0.23
CPSF4-210ENST00000469897 TAF3Q5VWG9 929 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 DHRS13Q6UX07 377 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 Q6ZVU0 165 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 DSG4Q86SJ6 1040 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 PRPF39Q86UA1 669 aaKnown RBP13.64□□□□□ -0.23
CPSF4-210ENST00000469897 ERICH1Q86X53 443 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 ZDHHC17Q8IUH5 632 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 FAM114A1Q8IWE2 563 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 SH2D3CQ8N5H7 860 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 EID2Q8N6I1 236 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 TMEM35BQ8NCS4 154 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 SAP25Q8TEE9 199 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 C18orf8Q96DM3 657 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 ARHGEF38Q9NXL2 777 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 FTSJ1Q9UET6 329 aa13.64□□□□□ -0.23
CPSF4-210ENST00000469897 DRGXA6NNA5 263 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 PES1O00541 588 aaKnown RBP13.63□□□□□ -0.23
CPSF4-210ENST00000469897 LATO43561 262 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 SNAP91O60641 907 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 F9P00740 461 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 SRCP12931 536 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms