RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 TIGD7Q6NT04 549 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-208ENST00000469529 BBS7Q8IWZ6 715 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 KLHDC8BQ8IXV7 354 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 CCDC13Q8IYE1 715 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 FIBINQ8TAL6 211 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 CASKIN2Q8WXE0 1202 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 ANKRD7Q92527 254 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 SUSD6Q92537 303 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 ART4Q93070 314 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 SNF8Q96H20 258 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 CCDC114Q96M63 670 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 PRICKLE1Q96MT3 831 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-208ENST00000469529 SPATA13Q96N96 652 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 ZNF599Q96NL3 588 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 LGMNQ99538 433 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 IL12RB2Q99665 862 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 ACE2Q9BYF1 805 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-208ENST00000469529 SLC2A11Q9BYW1 496 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 TSPYL1Q9H0U9 437 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 ZDHHC18Q9NUE0 388 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 GRHL1Q9NZI5 618 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 NOTCH4Q99466 2003 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 BRWD1Q9NSI6 2320 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 TYW5A2RUC4 315 aaKnown RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 KCNN4O15554 427 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 ERLIN1O75477 346 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 STK10O94804 968 aaKnown RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 SEC31AO94979 1220 aaKnown RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 LUC7L3O95232 432 aaKnown RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 PRAMEF12O95522 483 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 PEX11BO96011 259 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 KCNA5P22460 613 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 ECHS1P30084 290 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 ACTN2P35609 894 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 ADCY8P40145 1251 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 RPL21P46778 160 aaKnown RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 IFNAR2P48551 515 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 PAPOLAP51003 745 aaKnown RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 GDF10P55107 478 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 GNA12Q03113 381 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 IL10RBQ08334 325 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 SLC12A1Q13621 1099 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 CBX2Q14781 532 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 FAM78AQ5JUQ0 283 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 FYB2Q5VWT5 728 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 RHBDF2Q6PJF5 856 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 EP400NLQ6ZTU2 488 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 HOOK3Q86VS8 718 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 TP53INP2Q8IXH6 220 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 TEX26Q8N6G2 289 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 TDRD5Q8NAT2 981 aaKnown RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 GLIS1Q8NBF1 620 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 ARHGEF2Q92974 986 aaKnown RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 IRF7Q92985 503 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 TEKT5Q96M29 485 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 NECAB3Q96P71 396 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 TRIM51Q9BSJ1 452 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 IGSF9Q9P2J2 1179 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 IPO11Q9UI26 975 aaKnown RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 FBXO10Q9UK96 956 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 TPX2Q9ULW0 747 aaKnown RBP13.05□□□□□ -0.32
TRAF4-208ENST00000469529 SNX24Q9Y343 169 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 OR51B4Q9Y5P0 310 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 MYO16Q9Y6X6 1858 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 ANAPC1Q9H1A4 1944 aa13.05□□□□□ -0.32
TRAF4-208ENST00000469529 ATG2AQ2TAZ0 1938 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 ZSCAN5CA6NGD5 496 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-208ENST00000469529 DNALI1O14645 258 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-208ENST00000469529 KDELR3O43731 214 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 TBX10O75333 385 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 CYBBP04839 570 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 VAV1P15498 845 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 FDFT1P37268 417 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 RENBPP51606 427 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 MRPS25P82663 173 aaKnown RBP13.04□□□□□ -0.32
TRAF4-208ENST00000469529 CDK16Q00536 496 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 DLX2Q07687 328 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-208ENST00000469529 FCHO2Q0JRZ9 810 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 CALCOCO2Q13137 446 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 MORF4L2Q15014 288 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 TRADDQ15628 312 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 PARP6Q2NL67 630 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 ANO4Q32M45 955 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 LEXMQ3ZCV2 418 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 MAP9Q49MG5 647 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 ANKRD20A2Q5SQ80 823 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 ANKRD20A1Q5TYW2 823 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 ANKRD20A3Q5VUR7 823 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 CXorf57Q6NSI4 855 aaKnown RBP13.04□□□□□ -0.32
TRAF4-208ENST00000469529 HIBCHQ6NVY1 386 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-208ENST00000469529 EMBQ6PCB8 327 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 ZDHHC24Q6UX98 284 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 RELL1Q8IUW5 271 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 CFAP52Q8N1V2 620 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 SMRP1Q8NCR6 262 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 CCNYQ8ND76 341 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 BPIFB1Q8TDL5 484 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 OSCP1Q8WVF1 389 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 ALG14Q96F25 216 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms