RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 RPL6Q02878 288 aaKnown RBP13.24□□□□□ -0.29
COL5A1-206ENST00000465877 GFPT1Q06210 699 aaPredicted RBP13.24□□□□□ -0.29
COL5A1-206ENST00000465877 SPEM2Q0P670 501 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 CCDC122Q5T0U0 273 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 RWDD4Q6NW29 188 aaKnown RBP13.24□□□□□ -0.29
COL5A1-206ENST00000465877 NLRP14Q86W24 1093 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 CNGA4Q8IV77 575 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 DRC7Q8IY82 874 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 OR8K1Q8NGG5 319 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 PSMB7Q99436 277 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 C2orf49Q9BVC5 232 aaPredicted RBP13.24□□□□□ -0.29
COL5A1-206ENST00000465877 MAGEB5Q9BZ81 275 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 DEF6Q9H4E7 631 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 PARD6AQ9NPB6 346 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 PRSS16Q9NQE7 514 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 TMEM248Q9NWD8 314 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 VPS51Q9UID3 782 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 FZD10Q9ULW2 581 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 USP18Q9UMW8 372 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 PCDHGA5Q9Y5G8 931 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 CEP250Q9BV73 2442 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 A0A0D9SEW6 157 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 SSU72P8A0A1W2PR75 194 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 ILVBLA1L0T0 632 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 TTC34A8MYJ7 566 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 LRCH4O75427 683 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 C7P10643 843 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 ACADMP11310 421 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 RHOQP17081 205 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 L1CAMP32004 1257 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 MPLP40238 635 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 PI4KAP42356 2102 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 MAPKAPK2P49137 400 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 TPMTP51580 245 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 ADKP55263 362 aaKnown RBP13.23□□□□□ -0.29
COL5A1-206ENST00000465877 KRT83P78385 493 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 TBX2Q13207 712 aaPredicted RBP13.23□□□□□ -0.29
COL5A1-206ENST00000465877 SEMA3BQ13214 749 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 MAPK8IP2Q13387 824 aaPredicted RBP13.23□□□□□ -0.29
COL5A1-206ENST00000465877 SLC18A3Q16572 532 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 DAB2IPQ5VWQ8 1189 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 ZNF776Q68DI1 518 aaPredicted RBP13.23□□□□□ -0.29
COL5A1-206ENST00000465877 SLC36A4Q6YBV0 504 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 ZNF783Q6ZMS7 281 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 ARMCX6Q7L4S7 300 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 CYP2U1Q7Z449 544 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 METTL3Q86U44 580 aaKnown RBP13.23□□□□□ -0.29
COL5A1-206ENST00000465877 KIAA2013Q8IYS2 634 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 PYROXD2Q8N2H3 581 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 SH2D3CQ8N5H7 860 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 OR7D4Q8NG98 312 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 ARHGEF26Q96DR7 871 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 PEBP4Q96S96 227 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 EPAS1Q99814 870 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 SNRNP25Q9BV90 132 aaKnown RBP13.23□□□□□ -0.29
COL5A1-206ENST00000465877 ARRDC1-AS1Q9H2J1 176 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 NDFIP2Q9NV92 336 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 ZNHIT6Q9NWK9 470 aaKnown RBP13.23□□□□□ -0.29
COL5A1-206ENST00000465877 GPATCH2LQ9NWQ4 482 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 SUN2Q9UH99 717 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 SLCO3A1Q9UIG8 710 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 ANAPC7Q9UJX3 599 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 AP4E1Q9UPM8 1137 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 HS3ST2Q9Y278 367 aa13.23□□□□□ -0.29
COL5A1-206ENST00000465877 PTPRZ1P23471 2315 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 ATXN2Q99700 1313 aaKnown RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 SHROOM3Q8TF72 1996 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 MAP3K13O43283 966 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 CREB3O43889 395 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 SNAP91O60641 907 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 RNF8O76064 485 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 IGLV3-19P01714 112 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 CYP1A2P05177 515 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 VAV1P15498 845 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 TGM1P22735 817 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 GLDCP23378 1020 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 MIPP30301 263 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 NNMTP40261 264 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 DHPSP49366 369 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 GALCP54803 685 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 RPS14P62263 151 aaKnown RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 CREB5Q02930 508 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 CCDC6Q16204 474 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 TSR1Q2NL82 804 aaKnown RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 ASTE1Q2TB18 679 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 TTC31Q49AM3 519 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 C9orf64Q5T6V5 341 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 CYP4V2Q6ZWL3 525 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 LPCAT2Q7L5N7 544 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 GAS2L3Q86XJ1 694 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 TMEFF1Q8IYR6 380 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 ARFGAP1Q8N6T3 406 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 RTL3Q8N8U3 475 aaKnown RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 ZNF564Q8TBZ8 553 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 NUP85Q9BW27 656 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 RSPH9Q9H1X1 276 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-206ENST00000465877 ATP13A1Q9HD20 1204 aa13.22□□□□□ -0.29
COL5A1-206ENST00000465877 SEMA4GQ9NTN9 838 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms