RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 C2P06681 752 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 ZFXP17010 805 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 ACAT1P24752 427 aaKnown RBP11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 GARSP41250 739 aaKnown RBP11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 NUMBP49757 651 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 SERPINB8P50452 374 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 RARS2Q5T160 578 aaKnown RBP11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 BNC2Q6ZN30 1099 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 AMIGO2Q86SJ2 522 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 FBXO16Q8IX29 292 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 KYQ8NBH2 561 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 CENPIQ92674 756 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 SPATA33Q96N06 139 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 FERMT1Q9BQL6 677 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 PRDM12Q9H4Q4 367 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 GALNT8Q9NY28 637 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 CROCCQ5TZA2 2017 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 C19orf81C9J6K1 198 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 GAS2O43903 313 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 PDGFRBP09619 1106 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 PTPN1P18031 435 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 PTPN9P43378 593 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 LIMK2P53671 638 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 ZNF280AP59817 542 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 RPL26P61254 145 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 RBP5P82980 135 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 GRTP1Q5TC63 336 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 DCAF15Q66K64 600 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 B3GNT6Q6ZMB0 384 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 CLEC14AQ86T13 490 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 URGCPQ8TCY9 931 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 SLC16A10Q8TF71 515 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 NPAS2Q99743 824 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 ASB7Q9H672 318 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 NMRAL1Q9HBL8 299 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 PRMT7Q9NVM4 692 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 ZDHHC2Q9UIJ5 367 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 HEMK1Q9Y5R4 338 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 SBF1O95248 1867 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 RGSL1A5PLK6 1076 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 TMEM233B4DJY2 109 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 PDLIM1O00151 329 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 MATN2O00339 956 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 GRID2O43424 1007 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 TRIM13O60858 407 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 PIGNO95427 931 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 SBK3P0C264 359 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 MCF2P10911 925 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 AVPR1AP37288 418 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 PPP2R5DQ14738 602 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 MYBPC3Q14896 1274 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 GJC2Q5T442 439 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 NXNQ6DKJ4 435 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 DLK2Q6UY11 383 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 OR6B3Q8NGW1 331 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 ZSCAN18Q8TBC5 510 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 TMA16Q96EY4 203 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 SEMA6AQ9H2E6 1030 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 RAB26Q9ULW5 256 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 ZCWPW2A0A1B0GU75 182 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 ZNF487B1APH4 448 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 SOCS7O14512 581 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 PHGDHO43175 533 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 RNASEH2AO75792 299 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 C22orf31O95567 290 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 PENKP01210 267 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 THRAP10827 490 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 ARL4AP40617 200 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 GMPSP49915 693 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 SCNN1BP51168 640 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 CYLC2Q14093 348 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 NRF1Q16656 503 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 ARL13AQ5H913 290 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 GLRA4Q5JXX5 417 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 CELF3Q5SZQ8 465 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 CERCAMQ5T4B2 595 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 C16orf89Q6UX73 402 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 FAM43BQ6ZT52 329 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 PID1Q7Z2X4 250 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 ZMAT2Q96NC0 199 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 MRPL1Q9BYD6 325 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 MRPS26Q9BYN8 205 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 VPS33BQ9H267 617 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 TUBGCP4Q9UGJ1 667 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 FZD10Q9ULW2 581 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 TMCO1Q9UM00 188 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 PRPF19Q9UMS4 504 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 GJA3Q9Y6H8 435 aa11.97□□□□□ -0.49
PDZRN3-203ENST00000462146 MYLKQ15746 1914 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 POLR2AP24928 1970 aaKnown RBP11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 H3BSA7 217 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 TPH1P17752 444 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 FGFR3P22607 806 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 SPRP35270 261 aaPredicted RBP11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 GRIA4P48058 902 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 NAB1Q13506 487 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 APOFQ13790 326 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 SPANXN3Q5MJ09 141 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 LCA5Q86VQ0 697 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms