RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 FAM129BQ96TA1 746 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 DNAAF2Q9NVR5 837 aaKnown RBP19.45■□□□□ 0.7
COL5A1-203ENST00000460264 FBXL12Q9NXK8 326 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 NCKAP1Q9Y2A7 1128 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 SLCO1B1Q9Y6L6 691 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 TMEM131Q92545 1883 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 PCNX2A6NKB5 2137 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 CEP295Q9C0D2 2601 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 IGLV3-10A0A075B6K4 115 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 A0A1W2PP55 124 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 UPK3BL1B0FP48 263 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 UPK3BL2E5RIL1 263 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 ENDOD1O94919 500 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 NSFP46459 744 aaKnown RBP19.44■□□□□ 0.7
COL5A1-203ENST00000460264 ATP11AP98196 1134 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 CLEC16AQ2KHT3 1053 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 PHLDB2Q86SQ0 1253 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 PIP4P1Q86T03 277 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 BIRC7Q96CA5 298 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 HAPLN3Q96S86 360 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 ZDHHC5Q9C0B5 715 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 MUC3BQ9H195 1237 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 SLC25A13Q9UJS0 675 aa19.44■□□□□ 0.7
COL5A1-203ENST00000460264 DRGXA6NNA5 263 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 E9PAM4 449 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 ATP9BO43861 1147 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 GJB3O75712 270 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 GJB6O95452 261 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 ADH1BP00325 375 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 RHOCP08134 193 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 SLC8A1P32418 973 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 GSCP56915 257 aaPredicted RBP19.43■□□□□ 0.7
COL5A1-203ENST00000460264 ZNF252P-AS1Q0IIN9 211 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 SFSWAPQ12872 951 aaKnown RBP19.43■□□□□ 0.7
COL5A1-203ENST00000460264 RAB6CQ53S08 254 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 LRRC31Q6UY01 552 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 TFAP2DQ7Z6R9 452 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 SETD3Q86TU7 594 aaPredicted RBP19.43■□□□□ 0.7
COL5A1-203ENST00000460264 PHF13Q86YI8 300 aaPredicted RBP19.43■□□□□ 0.7
COL5A1-203ENST00000460264 AADATQ8N5Z0 425 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 JOSD2Q8TAC2 188 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 RXFP2Q8WXD0 754 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 PSMB7Q99436 277 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 RAB6CQ9H0N0 254 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 MPP6Q9NZW5 540 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 ADAM22Q9P0K1 906 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 ADAMTS1Q9UHI8 967 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 FZD4Q9ULV1 537 aa19.43■□□□□ 0.7
COL5A1-203ENST00000460264 C2CD4BA6NLJ0 364 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 TEX33O43247 280 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 RNASEH2AO75792 299 aaKnown RBP19.42■□□□□ 0.7
COL5A1-203ENST00000460264 FSBPO95073 299 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 IGHV4-34P06331 123 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 CD59P13987 128 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 SDC4P31431 198 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 AFF3P51826 1226 aaKnown RBP19.42■□□□□ 0.7
COL5A1-203ENST00000460264 BNC1Q01954 994 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 CDO1Q16878 200 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 C15orf59Q2T9L4 293 aaPredicted RBP19.42■□□□□ 0.7
COL5A1-203ENST00000460264 CCDC14Q49A88 953 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 KIAA0895LQ68EN5 471 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 LRSAM1Q6UWE0 723 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 SH2D3CQ8N5H7 860 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 OMDQ99983 421 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 NEUROG2Q9H2A3 272 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 ZNF212Q9UDV6 495 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 HS3ST2Q9Y278 367 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 CHD5Q8TDI0 1954 aa19.42■□□□□ 0.7
COL5A1-203ENST00000460264 KNL1Q8NG31 2342 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 FAM47DPA6NHR8 397 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 SNAP91O60641 907 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 SRGAP2O75044 1071 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 IL1BP01584 269 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 CALB1P05937 261 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 C5AR1P21730 350 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 CD27P26842 260 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 PTPN9P43378 593 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 GALCP54803 685 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 DLG2Q15700 870 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 ACCSLQ4AC99 568 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 C6orf118Q5T5N4 469 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 NCEH1Q6PIU2 408 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 Q6ZVU0 165 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 MON1BQ7L1V2 547 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 DCAF4L2Q8NA75 395 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 CNTNAP3BQ96NU0 1288 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 AGPAT1Q99943 283 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 ORAI3Q9BRQ5 295 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 C2orf49Q9BVC5 232 aaPredicted RBP19.41■□□□□ 0.7
COL5A1-203ENST00000460264 CNTNAP3Q9BZ76 1288 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 SLC32A1Q9H598 525 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 TM9SF3Q9HD45 589 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 OSGEPQ9NPF4 335 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 RTN4Q9NQC3 1192 aaKnown RBP19.41■□□□□ 0.7
COL5A1-203ENST00000460264 SEPT11Q9NVA2 429 aaKnown RBP19.41■□□□□ 0.7
COL5A1-203ENST00000460264 VPS51Q9UID3 782 aa19.41■□□□□ 0.7
COL5A1-203ENST00000460264 A0A0D9SEW6 157 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 A0A1B0GVT2 93 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 SMTNL1A8MU46 457 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 C10orf142B7Z368 130 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms