RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 ABCG4Q9H172 646 aa18.58■□□□□ 0.56
CHCHD3-203ENST00000448878 CPNE5Q9HCH3 593 aa18.58■□□□□ 0.56
CHCHD3-203ENST00000448878 ARMCX3Q9UH62 379 aaPredicted RBP18.58■□□□□ 0.56
CHCHD3-203ENST00000448878 SLC12A6Q9UHW9 1150 aa18.58■□□□□ 0.56
CHCHD3-203ENST00000448878 C1QTNF3-AMACRE9PGA6 284 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 RNF225M0QZC1 329 aaPredicted RBP18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 ERVH48-1M5A8F1 160 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 SLC31A1O15431 190 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 PLRG1O43660 514 aaKnown RBP18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 NUDT1P36639 197 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 TMPRSS3P57727 454 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 GABREP78334 506 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 SULT2A1Q06520 285 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 CNTN1Q12860 1018 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 SLC12A1Q13621 1099 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 SYPL2Q5VXT5 272 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 SLC25A45Q8N413 288 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 UBR7Q8N806 425 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 ATP6V0D2Q8N8Y2 350 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 SLC39A13Q96H72 371 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 SLC25A13Q9UJS0 675 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 SARDHQ9UL12 918 aa18.57■□□□□ 0.56
CHCHD3-203ENST00000448878 SLC16A3O15427 465 aaKnown RBP18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 SLC7A4O43246 635 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 USP12O75317 370 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 THEGLP0DJG4 465 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 DGKAP23743 735 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 PRCPP42785 496 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 KRT85P78386 507 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 FKBP3Q00688 224 aaKnown RBP18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 NNTQ13423 1086 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 PCSK4Q6UW60 755 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 CCAR2Q8N163 923 aaKnown RBP18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 RNF34Q969K3 372 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 CCDC34Q96HJ3 373 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 BTN2A3PQ96KV6 586 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 ZNF578Q96N58 590 aaPredicted RBP18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 ZSWIM1Q9BR11 485 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 CALN1Q9BXU9 219 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 UCKL1Q9NWZ5 548 aa18.56■□□□□ 0.56
CHCHD3-203ENST00000448878 HELZ2Q9BYK8 2649 aaKnown RBP18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 KALRNO60229 2985 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 NYNRINQ9P2P1 1898 aaKnown RBP18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 SYNJ2BP-COX16A0A087WUM0 186 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 C10orf142B7Z368 130 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 KLK10O43240 276 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 SART1O43290 800 aaKnown RBP18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 RNGTTO60942 597 aaKnown RBP18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 ZNF202O95125 648 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 ALPPL2P10696 532 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 MYF5P13349 255 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 PRLRP16471 622 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 RHDQ02161 417 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 ANKRD40Q6AI12 368 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 TRIM69Q86WT6 500 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 LSMEM2Q8N112 164 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 OR4C6Q8NH72 309 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 KCNE4Q8WWG9 221 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 KAT5Q92993 513 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 SNX21Q969T3 373 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 DEPDC7Q96QD5 511 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 PPP1R9BQ96SB3 815 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 COX16Q9P0S2 106 aa18.55■□□□□ 0.56
CHCHD3-203ENST00000448878 OPA1O60313 960 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 CENPBP07199 599 aaPredicted RBP18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 ACADSBP45954 432 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 FMO5P49326 533 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 UCNP55089 124 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 KCNMA1Q12791 1236 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 DLG2Q15700 870 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 RABGAP1LQ5R372 815 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 AGBL4Q5VU57 503 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 Q6ZVU0 165 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 RRAGAQ7L523 313 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 FRS2Q8WU20 508 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 ERCC4Q92889 916 aaPredicted RBP18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 SLC35C1Q96A29 364 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 TRIM62Q9BVG3 475 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 FZD3Q9NPG1 666 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 WDR70Q9NW82 654 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 RMND1Q9NWS8 449 aa18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 FARP1Q9Y4F1 1045 aaPredicted RBP18.54■□□□□ 0.56
CHCHD3-203ENST00000448878 A0A1B0GVM2 712 aa18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 KCNU1A8MYU2 1149 aa18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 CSO75390 466 aaKnown RBP18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 TRUB2O95900 331 aaKnown RBP18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 OXCT1P55809 520 aa18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 CETN1Q12798 172 aa18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 PNOCQ13519 176 aa18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 LY6DQ14210 128 aa18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 RPRD1AQ96P16 312 aaPredicted RBP18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 GOLPH3LQ9H4A5 285 aa18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 POPDC2Q9HBU9 364 aa18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 PREBQ9HCU5 417 aa18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 KLHL11Q9NVR0 708 aa18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 VPS28Q9UK41 221 aa18.53■□□□□ 0.56
CHCHD3-203ENST00000448878 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 A0A1W2PQU0 124 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 TRIM49BA6NDI0 452 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms