RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ZNF143P52747 638 aaPredicted RBP14.23□□□□□ -0.13
VPS52-212ENST00000445902 ITGA7Q13683 1181 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 LAYNQ6UX15 382 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 TMEM26Q6ZUK4 368 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 TRIM50Q86XT4 487 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 DDHD1Q8NEL9 900 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 GPATCH1Q9BRR8 931 aaKnown RBP14.23□□□□□ -0.13
VPS52-212ENST00000445902 ILKAPQ9H0C8 392 aaPredicted RBP14.23□□□□□ -0.13
VPS52-212ENST00000445902 EFCAB1Q9HAE3 211 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 PXMP2Q9NR77 195 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 SYBUQ9NX95 663 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 GMPR2Q9P2T1 348 aaKnown RBP14.23□□□□□ -0.13
VPS52-212ENST00000445902 SQORQ9Y6N5 450 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 TK2O00142 265 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 SOCS2O14508 198 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 MCF2P10911 925 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 KPNA1P52294 538 aaPredicted RBP14.23□□□□□ -0.13
VPS52-212ENST00000445902 AARS2Q5JTZ9 985 aaKnown RBP14.23□□□□□ -0.13
VPS52-212ENST00000445902 DACT2Q5SW24 774 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 METTL21CQ5VZV1 264 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 HMBOX1Q6NT76 420 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 TTC33Q6PID6 262 aaPredicted RBP14.23□□□□□ -0.13
VPS52-212ENST00000445902 ZBTB49Q6ZSB9 765 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 SNRNP25Q9BV90 132 aaKnown RBP14.23□□□□□ -0.13
VPS52-212ENST00000445902 ADGRA2Q96PE1 1338 aa14.23□□□□□ -0.13
VPS52-212ENST00000445902 E7ENX8 843 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 TRIM13O60858 407 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 GABRB3P28472 473 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 MAGEA6P43360 314 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 TREML2Q5T2D2 321 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 FAM219BQ5XKK7 198 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 SETD3Q86TU7 594 aaPredicted RBP14.22□□□□□ -0.13
VPS52-212ENST00000445902 MCF2L2Q86YR7 1114 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 ACVR1CQ8NER5 493 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 BORCS5Q969J3 196 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 AGAP2Q99490 1192 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 NEURL2Q9BR09 285 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 CNPY3Q9BT09 278 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 ZDHHC2Q9UIJ5 367 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 A0A096LPK6 155 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 C9IYK1 514 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 H3BMQ9 156 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 GPR25O00155 361 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 MATN2O00339 956 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 HDAC3O15379 428 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 CCDC130P13994 396 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 PTGER2P43116 358 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 ATXN1P54253 815 aaKnown RBP14.22□□□□□ -0.13
VPS52-212ENST00000445902 NME3Q13232 169 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 DUOXA2Q1HG44 320 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 Q3C1V9 767 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 ARL13AQ5H913 290 aaPredicted RBP14.22□□□□□ -0.13
VPS52-212ENST00000445902 ZNF362Q5T0B9 420 aaPredicted RBP14.22□□□□□ -0.13
VPS52-212ENST00000445902 FAM183BPQ6ZVS7 135 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 CHST15Q7LFX5 561 aaPredicted RBP14.22□□□□□ -0.13
VPS52-212ENST00000445902 WDR49Q8IV35 697 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 BRSK2Q8IWQ3 736 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 ARL10Q8N8L6 244 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 TBC1D15Q8TC07 691 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 SLCO4A1Q96BD0 722 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 COG8Q96MW5 612 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 CXorf21Q9HAI6 301 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 SEPT10Q9P0V9 454 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 ZNF638Q14966 1978 aaKnown RBP14.22□□□□□ -0.13
VPS52-212ENST00000445902 LRRC37AA6NMS7 1700 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 FAM149AA5PLN7 773 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 ZNF839A8K0R7 811 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 H0YCG3 227 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 MED7O43513 233 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 PSAPP07602 524 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 TGM2P21980 687 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 CYP2F1P24903 491 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 TMED10P49755 219 aaKnown RBP14.22□□□□□ -0.13
VPS52-212ENST00000445902 NUMBP49757 651 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 EIF2B2P49770 351 aaKnown RBP14.22□□□□□ -0.13
VPS52-212ENST00000445902 PMS2P3Q13401 168 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 ZBED5Q49AG3 693 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 PITRM1Q5JRX3 1037 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 LYSMD3Q7Z3D4 306 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 LPGAT1Q92604 370 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 MCRS1Q96EZ8 462 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 HIPK3Q9H422 1215 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 RPF2Q9H7B2 306 aaKnown RBP14.22□□□□□ -0.13
VPS52-212ENST00000445902 SLC8A2Q9UPR5 921 aa14.22□□□□□ -0.13
VPS52-212ENST00000445902 COPG1Q9Y678 874 aaKnown RBP14.22□□□□□ -0.13
VPS52-212ENST00000445902 ANKRD12Q6UB98 2062 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 PCNTO95613 3336 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 CCDC78A2IDD5 438 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 TCAF2A6NFQ2 919 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 C2CD4BA6NLJ0 364 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 GOLGA8TH3BQL2 631 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 TRIM38O00635 465 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 NRP1O14786 923 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 GRID2O43424 1007 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 AKAP10O43572 662 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 TPST1O60507 370 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 USP12O75317 370 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 ALDH1A2O94788 518 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 BMP10O95393 424 aa14.21□□□□□ -0.13
VPS52-212ENST00000445902 CAPNS1P04632 268 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms