RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.64■■□□□ 1.05
VSX1-206ENST00000444511 TPX2Q9ULW0 747 aaKnown RBP21.64■■□□□ 1.05
VSX1-206ENST00000444511 GOLGA8CPA6NN73 597 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 ATXN1LP0C7T5 689 aaKnown RBP21.63■■□□□ 1.05
VSX1-206ENST00000444511 CYP11B1P15538 503 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 SULT1E1P49888 294 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 VASPP50552 380 aaPredicted RBP21.63■■□□□ 1.05
VSX1-206ENST00000444511 CDH4P55283 916 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 IL9RQ01113 521 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 KCNJ12Q14500 433 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 INAVAQ3KP66 663 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 BRMS1LQ5PSV4 323 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 OTUD1Q5VV17 481 aaPredicted RBP21.63■■□□□ 1.05
VSX1-206ENST00000444511 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.63■■□□□ 1.05
VSX1-206ENST00000444511 C14orf80Q86SX3 495 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 OR52K2Q8NGK3 314 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 ALG14Q96F25 216 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 NPY6RQ99463 290 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 TKTL2Q9H0I9 626 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 MUC3BQ9H195 1237 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 PAXBP1Q9Y5B6 917 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 FHOD1Q9Y613 1164 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 AKAP13Q12802 2813 aa21.63■■□□□ 1.05
VSX1-206ENST00000444511 TBC1D3DA0A087WVF3 549 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 TBC1D3IA0A087WXS9 549 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 TBC1D3EA0A087X179 549 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 TBC1D3KA0A087X1G2 549 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 TBC1D3FA6NER0 549 aaPredicted RBP21.62■■□□□ 1.05
VSX1-206ENST00000444511 TBC1D3LB9A6J9 549 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 ATP9BO43861 1147 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 TBC1D3HP0C7X1 549 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 CD38P28907 300 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 CDH5P33151 784 aaPredicted RBP21.62■■□□□ 1.05
VSX1-206ENST00000444511 DRD3P35462 400 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 CXCR3P49682 368 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 KCNMA1Q12791 1236 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 FAM102AQ5T9C2 384 aaPredicted RBP21.62■■□□□ 1.05
VSX1-206ENST00000444511 KLHDC7AQ5VTJ3 777 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 TAF3Q5VWG9 929 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 FAM46CQ5VWP2 391 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 TBC1D3GQ6DHY5 549 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 TBC1D3CQ6IPX1 549 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 DPY19L2P1Q6NXN4 242 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 ERICH1Q86X53 443 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 TBC1D3Q8IZP1 549 aaPredicted RBP21.62■■□□□ 1.05
VSX1-206ENST00000444511 C18orf8Q96DM3 657 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 SERAC1Q96JX3 654 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 TOR4AQ9NXH8 423 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 ARHGEF38Q9NXL2 777 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 TBC1D30Q9Y2I9 924 aa21.62■■□□□ 1.05
VSX1-206ENST00000444511 A0A1B0GTQ1 180 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 TNFSF14O43557 240 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 ADCY5O95622 1261 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 F9P00740 461 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 WNT1P04628 370 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 ZNF18P17022 549 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 TFE3P19532 575 aaPredicted RBP21.61■■□□□ 1.05
VSX1-206ENST00000444511 GABRB2P47870 512 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 METAP1P53582 386 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 DEUP1Q05D60 604 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 DLG2Q15700 870 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 C5orf22Q49AR2 442 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 SLC45A4Q5BKX6 768 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 CCNI2Q6ZMN8 369 aaPredicted RBP21.61■■□□□ 1.05
VSX1-206ENST00000444511 Q6ZVU0 165 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 ELF4Q99607 663 aaPredicted RBP21.61■■□□□ 1.05
VSX1-206ENST00000444511 SAMSN1Q9NSI8 373 aaKnown RBP21.61■■□□□ 1.05
VSX1-206ENST00000444511 OR51B4Q9Y5P0 310 aa21.61■■□□□ 1.05
VSX1-206ENST00000444511 FAM170AA1A519 330 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 C10orf142B7Z368 130 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 C1QTNF3-AMACRE9PGA6 284 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 PLK4O00444 970 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 SLC7A4O43246 635 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 BNIP3LO60238 219 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 CNTN5O94779 1100 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 RHOCP08134 193 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 UCHL3P15374 230 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 SCNN1AP37088 669 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 PPP2CBP62714 309 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 PPP2CAP67775 309 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 KRT83P78385 493 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 SCAPQ12770 1279 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 SLC25A52Q3SY17 297 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 PRAMEF14Q5SWL7 426 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 LRRC31Q6UY01 552 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 SH2D3CQ8N5H7 860 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 MSANTD4Q8NCY6 345 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 NT5C3BQ969T7 300 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 PGAP3Q96FM1 320 aaPredicted RBP21.6■■□□□ 1.05
VSX1-206ENST00000444511 TBCBQ99426 244 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 C2orf49Q9BVC5 232 aaPredicted RBP21.6■■□□□ 1.05
VSX1-206ENST00000444511 KDM4CQ9H3R0 1056 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 GDF3Q9NR23 364 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 TMEM51Q9NW97 253 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 RALYQ9UKM9 306 aaKnown RBP21.6■■□□□ 1.05
VSX1-206ENST00000444511 SARDHQ9UL12 918 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 CFAP47Q6ZTR5 3102 aa21.6■■□□□ 1.05
VSX1-206ENST00000444511 A0A1W2PR77 199 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 WNT9AO14904 365 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 MCF2LO15068 1137 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms