RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 ATP9BO43861 1147 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 VNN2O95498 520 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 GMPRP36959 345 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 SLC11A1P49279 550 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 CCDC15Q0P6D6 951 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 SNCBQ16143 134 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 SPANXN3Q5MJ09 141 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 ABI1Q8IZP0 508 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 ATPAF2Q8N5M1 289 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 SLAIN1Q8ND83 568 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 CDKL2Q92772 493 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 MFSD3Q96ES6 412 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 SLC39A13Q96H72 371 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 LRRC40Q9H9A6 602 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 BFARQ9NZS9 450 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 DCTN4Q9UJW0 460 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 TRIM33Q9UPN9 1127 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 SLC27A5Q9Y2P5 690 aa15.7■□□□□ 0.1
LRCH3-202ENST00000414675 ERI2A8K979 691 aaKnown RBP15.69■□□□□ 0.1
LRCH3-202ENST00000414675 TPP1O14773 563 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 FGF10O15520 208 aaPredicted RBP15.69■□□□□ 0.1
LRCH3-202ENST00000414675 CACNG3O60359 315 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 TBX18O95935 607 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 CCNB1P14635 433 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 CCNCP24863 283 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 CRHR1P34998 444 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 MAP2K2P36507 400 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 COG7P83436 770 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 MSANTD2Q6P1R3 559 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 TMEM135Q86UB9 458 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 TMEM173Q86WV6 379 aaPredicted RBP15.69■□□□□ 0.1
LRCH3-202ENST00000414675 GBP7Q8N8V2 638 aaPredicted RBP15.69■□□□□ 0.1
LRCH3-202ENST00000414675 SH3TC2Q8TF17 1288 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 ERP27Q96DN0 273 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 SERPINB11Q96P15 392 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 ELAC1Q9H777 363 aaKnown RBP15.69■□□□□ 0.1
LRCH3-202ENST00000414675 ZFATQ9P243 1243 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 PCDHB7Q9Y5E2 793 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 MT-CYBP00156 380 aaPredicted RBP15.69■□□□□ 0.1
LRCH3-202ENST00000414675 ITGA2BP08514 1039 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 NEFHP12036 1026 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 COL6A1P12109 1028 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 FGFR3P22607 806 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 CNTFP26441 200 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 MLLT6P55198 1093 aaPredicted RBP15.69■□□□□ 0.1
LRCH3-202ENST00000414675 KCNJ2P63252 427 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 ANKRD20A4Q4UJ75 823 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 AFMIDQ63HM1 303 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 KLHDC8BQ8IXV7 354 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 AZIN2Q96A70 460 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 AGAP2Q99490 1192 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 NOL6Q9H6R4 1146 aaKnown RBP15.69■□□□□ 0.1
LRCH3-202ENST00000414675 CATSPERBQ9H7T0 1116 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 CHRAC1Q9NRG0 131 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 IL37Q9NZH6 218 aa15.69■□□□□ 0.1
LRCH3-202ENST00000414675 CCDC195A0A1B0GUA6 201 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 CHUKO15111 745 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 MYCP01106 439 aaPredicted RBP15.68■□□□□ 0.1
LRCH3-202ENST00000414675 MAGEA11P43364 429 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 ZNF33AQ06730 810 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 NAB1Q13506 487 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 PDE1CQ14123 709 aaPredicted RBP15.68■□□□□ 0.1
LRCH3-202ENST00000414675 RTP2Q5QGT7 225 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 FYB2Q5VWT5 728 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 ZNF280DQ6N043 979 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 C16orf46Q6P387 395 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 NLRP9Q7RTR0 991 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 TBC1D1Q86TI0 1168 aaPredicted RBP15.68■□□□□ 0.1
LRCH3-202ENST00000414675 ZNF683Q8IZ20 524 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 RTL3Q8N8U3 475 aaKnown RBP15.68■□□□□ 0.1
LRCH3-202ENST00000414675 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.68■□□□□ 0.1
LRCH3-202ENST00000414675 ZNF296Q8WUU4 475 aaPredicted RBP15.68■□□□□ 0.1
LRCH3-202ENST00000414675 IL12RB2Q99665 862 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.68■□□□□ 0.1
LRCH3-202ENST00000414675 FBXO44Q9H4M3 255 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 ZNF395Q9H8N7 513 aaPredicted RBP15.68■□□□□ 0.1
LRCH3-202ENST00000414675 EMCNQ9ULC0 261 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 TLR6Q9Y2C9 796 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 USP1O94782 785 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 GSRP00390 522 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 GNRH1P01148 92 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 HTR7P34969 479 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 TBX4P57082 545 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 IRX4P78413 519 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 EFEMP1Q12805 493 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 TAS1R1Q7RTX1 841 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 KIF2BQ8N4N8 673 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 BCL7CQ8WUZ0 217 aaPredicted RBP15.68■□□□□ 0.1
LRCH3-202ENST00000414675 ZNF778Q96MU6 729 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 KCNK13Q9HB14 408 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 CD248Q9HCU0 757 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 SIRPGQ9P1W8 387 aa15.68■□□□□ 0.1
LRCH3-202ENST00000414675 FNDC1Q4ZHG4 1894 aaPredicted RBP15.67■□□□□ 0.1
LRCH3-202ENST00000414675 CCDC78A2IDD5 438 aa15.67■□□□□ 0.1
LRCH3-202ENST00000414675 MTMR11A4FU01 709 aa15.67■□□□□ 0.1
LRCH3-202ENST00000414675 CFAP73A6NFT4 308 aa15.67■□□□□ 0.1
LRCH3-202ENST00000414675 C2CD2LO14523 706 aa15.67■□□□□ 0.1
LRCH3-202ENST00000414675 KLF11O14901 512 aa15.67■□□□□ 0.1
LRCH3-202ENST00000414675 HLA-DQB2P05538 268 aa15.67■□□□□ 0.1
LRCH3-202ENST00000414675 TROVE2P10155 538 aaKnown RBP eCLIP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms