RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CDK7P50613 346 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 RAP1GDS1P52306 607 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 ABCE1P61221 599 aaKnown RBP17.19■□□□□ 0.34
NUP50-203ENST00000407019 ARHGAP8P85298 464 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 KDSRQ06136 332 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 MGAT3Q09327 533 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 TUBB3Q13509 450 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 DNAL1Q4LDG9 190 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 HSP90AA5PQ58FG0 334 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 SERINC5Q86VE9 423 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 KCNMB4Q86W47 210 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 RBM15BQ8NDT2 890 aaKnown RBP17.19■□□□□ 0.34
NUP50-203ENST00000407019 TRPV1Q8NER1 839 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 DQX1Q8TE96 717 aaKnown RBP17.19■□□□□ 0.34
NUP50-203ENST00000407019 CELF6Q96J87 481 aaKnown RBP17.19■□□□□ 0.34
NUP50-203ENST00000407019 SORT1Q99523 831 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 APOL2Q9BQE5 337 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 TRIM62Q9BVG3 475 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 STOML1Q9UBI4 398 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 SOX13Q9UN79 622 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 MAGED2Q9UNF1 606 aaPredicted RBP17.19■□□□□ 0.34
NUP50-203ENST00000407019 LRRC42Q9Y546 428 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 COL4A4P53420 1690 aaPredicted RBP17.18■□□□□ 0.34
NUP50-203ENST00000407019 E2F8A0AVK6 867 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 TIMM44O43615 452 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 JCHAINP01591 159 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 CYP11A1P05108 521 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 AOC1P19801 751 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 GMPRP36959 345 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 CSE1LP55060 971 aaKnown RBP17.18■□□□□ 0.34
NUP50-203ENST00000407019 MPP3Q13368 585 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 UBAP2LQ14157 1087 aaKnown RBP17.18■□□□□ 0.34
NUP50-203ENST00000407019 NAA25Q14CX7 972 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 RCN1Q15293 331 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 CCDC6Q16204 474 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 PAN2Q504Q3 1202 aaKnown RBP17.18■□□□□ 0.34
NUP50-203ENST00000407019 NAPEPLDQ6IQ20 393 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 RASAL3Q86YV0 1011 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 WDR60Q8WVS4 1066 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 STMN2Q93045 179 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 AZIN2Q96A70 460 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 FAM161BQ96MY7 647 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 OSBPL2Q9H1P3 480 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 AGO3Q9H9G7 860 aaKnown RBP17.18■□□□□ 0.34
NUP50-203ENST00000407019 BATF3Q9NR55 127 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 C20orf96Q9NUD7 363 aaPredicted RBP17.18■□□□□ 0.34
NUP50-203ENST00000407019 ZNF358Q9NW07 568 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 GEMIN8Q9NWZ8 242 aaKnown RBP17.18■□□□□ 0.34
NUP50-203ENST00000407019 DNAJC28Q9NX36 388 aa17.18■□□□□ 0.34
NUP50-203ENST00000407019 APOBEC2Q9Y235 224 aaKnown RBP17.18■□□□□ 0.34
NUP50-203ENST00000407019 A0A096LPK6 155 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 PSMD3O43242 534 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 KRT36O76013 467 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 B3GAT3O94766 335 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 PSMG1O95456 288 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 CYP2C18P33260 490 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 BRCC3P46736 316 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 HARS2P49590 506 aaKnown RBP17.17■□□□□ 0.34
NUP50-203ENST00000407019 RAB27AP51159 221 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 ZNF33AQ06730 810 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 CDH17Q12864 832 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 ITGA9Q13797 1035 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 RABGAP1LQ5R372 815 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 CST9Q5W186 159 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 RWDD4Q6NW29 188 aaKnown RBP17.17■□□□□ 0.34
NUP50-203ENST00000407019 FBXO27Q8NI29 283 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 DPF3Q92784 378 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 NAF1Q96HR8 494 aaKnown RBP17.17■□□□□ 0.34
NUP50-203ENST00000407019 DSEQ9UL01 958 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 PLA2G4CQ9UP65 541 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 TRPM7Q96QT4 1865 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 LUC7L3O95232 432 aaKnown RBP17.17■□□□□ 0.34
NUP50-203ENST00000407019 POMCP01189 267 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 TPH1P17752 444 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 DNAJB2P25686 324 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 PAXIP1Q6ZW49 1069 aaPredicted RBP17.17■□□□□ 0.34
NUP50-203ENST00000407019 LINC00523Q86TU6 105 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 PLD6Q8N2A8 252 aaKnown RBP17.17■□□□□ 0.34
NUP50-203ENST00000407019 ZSCAN18Q8TBC5 510 aaPredicted RBP17.17■□□□□ 0.34
NUP50-203ENST00000407019 TSGA13Q96PP4 275 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 CHRAC1Q9NRG0 131 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 IARS2Q9NSE4 1012 aaKnown RBP17.17■□□□□ 0.34
NUP50-203ENST00000407019 TMLHEQ9NVH6 421 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 PNPOQ9NVS9 261 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 UBP1Q9NZI7 540 aa17.17■□□□□ 0.34
NUP50-203ENST00000407019 ZNF623O75123 536 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 KLHL2O95198 593 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 IGLV3-25P01717 112 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 F7P08709 466 aaPredicted RBP17.16■□□□□ 0.34
NUP50-203ENST00000407019 ALOX15P16050 662 aaPredicted RBP17.16■□□□□ 0.34
NUP50-203ENST00000407019 ZNF157P51786 506 aaPredicted RBP17.16■□□□□ 0.34
NUP50-203ENST00000407019 MXRA7P84157 204 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 ATG14Q6ZNE5 492 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 BEND5Q7L4P6 421 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 MAVSQ7Z434 540 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 CLEC14AQ86T13 490 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 SCUBE1Q8IWY4 988 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 URGCPQ8TCY9 931 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 USP33Q8TEY7 942 aa17.16■□□□□ 0.34
NUP50-203ENST00000407019 PKMYT1Q99640 499 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms