RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 CYLC2Q14093 348 aaPredicted RBP17.09■□□□□ 0.33
SIPA1-201ENST00000394224 RARS2Q5T160 578 aaKnown RBP17.09■□□□□ 0.33
SIPA1-201ENST00000394224 IL23RQ5VWK5 629 aa17.09■□□□□ 0.33
SIPA1-201ENST00000394224 OLFML1Q6UWY5 402 aa17.09■□□□□ 0.33
SIPA1-201ENST00000394224 BNC2Q6ZN30 1099 aaPredicted RBP17.09■□□□□ 0.33
SIPA1-201ENST00000394224 NT5DC4Q86YG4 428 aa17.09■□□□□ 0.33
SIPA1-201ENST00000394224 ZMAT2Q96NC0 199 aaKnown RBP17.09■□□□□ 0.33
SIPA1-201ENST00000394224 HOXC10Q9NYD6 342 aa17.09■□□□□ 0.33
SIPA1-201ENST00000394224 FAF1Q9UNN5 650 aaPredicted RBP17.09■□□□□ 0.33
SIPA1-201ENST00000394224 MTF2Q9Y483 593 aaPredicted RBP17.09■□□□□ 0.33
SIPA1-201ENST00000394224 PDLIM1O00151 329 aa17.08■□□□□ 0.33
SIPA1-201ENST00000394224 TSPAN3O60637 253 aa17.08■□□□□ 0.33
SIPA1-201ENST00000394224 AOC1P19801 751 aa17.08■□□□□ 0.33
SIPA1-201ENST00000394224 PDAP1Q13442 181 aaKnown RBP17.08■□□□□ 0.33
SIPA1-201ENST00000394224 NCBP2-AS2Q69YL0 99 aa17.08■□□□□ 0.33
SIPA1-201ENST00000394224 KYQ8NBH2 561 aa17.08■□□□□ 0.33
SIPA1-201ENST00000394224 LHX5Q9H2C1 402 aa17.08■□□□□ 0.33
SIPA1-201ENST00000394224 NOL11Q9H8H0 719 aaKnown RBP17.08■□□□□ 0.33
SIPA1-201ENST00000394224 EVPLQ92817 2033 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 NR4A1P22736 598 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 NMBRP28336 390 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 STT3AP46977 705 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 PSMD7P51665 324 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 PLOD1Q02809 727 aaPredicted RBP17.08■□□□□ 0.32
SIPA1-201ENST00000394224 DYNC1I2Q13409 638 aaKnown RBP17.08■□□□□ 0.32
SIPA1-201ENST00000394224 GRM3Q14832 879 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 TRPM4Q8TD43 1214 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 OLFM3Q96PB7 478 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 EIF2AQ9BY44 585 aaKnown RBP17.08■□□□□ 0.32
SIPA1-201ENST00000394224 ILKAPQ9H0C8 392 aaPredicted RBP17.08■□□□□ 0.32
SIPA1-201ENST00000394224 AS3MTQ9HBK9 375 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 SPON1Q9HCB6 807 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 TRPC7Q9HCX4 862 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 VANGL2Q9ULK5 521 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
SIPA1-201ENST00000394224 NDC80O14777 642 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 NRP1O14786 923 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 ZBTB24O43167 697 aaPredicted RBP17.08■□□□□ 0.32
SIPA1-201ENST00000394224 AKAP10O43572 662 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 BEST1O76090 585 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 MOCS2O96007 188 aaPredicted RBP17.08■□□□□ 0.32
SIPA1-201ENST00000394224 DPP6P42658 865 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 ITKQ08881 620 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 SLC12A1Q13621 1099 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 RTKN2Q8IZC4 609 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 URGCPQ8TCY9 931 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 RHOBTB2Q9BYZ6 727 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 NME7Q9Y5B8 376 aa17.08■□□□□ 0.32
SIPA1-201ENST00000394224 TIPRLO75663 272 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 MAP3K7CLP57077 242 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 SURF1Q15526 300 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 SEL1L3Q68CR1 1132 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 TRIM67Q6ZTA4 783 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 OSMRQ99650 979 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 TMEM134Q9H6X4 195 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 DCDC2Q9UHG0 476 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 PRRC2BQ5JSZ5 2229 aaKnown RBP17.07■□□□□ 0.32
SIPA1-201ENST00000394224 TFEBP19484 476 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 CSE1LP55060 971 aaKnown RBP17.07■□□□□ 0.32
SIPA1-201ENST00000394224 CDH13P55290 713 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 FKBP1AP62942 108 aaKnown RBP17.07■□□□□ 0.32
SIPA1-201ENST00000394224 MBTD1Q05BQ5 628 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 CSHL1Q14406 222 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 GSTA3Q16772 222 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 TBC1D25Q3MII6 688 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 FSCBQ5H9T9 825 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 CLEC6AQ6EIG7 209 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 KYAT3Q6YP21 454 aaKnown RBP17.07■□□□□ 0.32
SIPA1-201ENST00000394224 NUP93Q8N1F7 819 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 PARP8Q8N3A8 854 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 ARNTL2Q8WYA1 636 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 KCNK16Q96T55 309 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 TMEM79Q9BSE2 394 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 ACE2Q9BYF1 805 aaPredicted RBP17.07■□□□□ 0.32
SIPA1-201ENST00000394224 NXF3Q9H4D5 531 aaKnown RBP17.07■□□□□ 0.32
SIPA1-201ENST00000394224 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 BFARQ9NZS9 450 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 GPC4O75487 556 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 TFAP2AP05549 437 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 GARSP41250 739 aaKnown RBP17.07■□□□□ 0.32
SIPA1-201ENST00000394224 RBP5P82980 135 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 MPP3Q13368 585 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 PTK2BQ14289 1009 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 AGKQ53H12 422 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 METTL7BQ6UX53 244 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 CATSPERGQ6ZRH7 1159 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 TSHZ1Q6ZSZ6 1077 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 DCBLD1Q8N8Z6 715 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 KLHL32Q96NJ5 620 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 FBRSL1Q9HCM7 1045 aaKnown RBP17.07■□□□□ 0.32
SIPA1-201ENST00000394224 PTGDR2Q9Y5Y4 395 aa17.07■□□□□ 0.32
SIPA1-201ENST00000394224 A0A0A0MRY4 1105 aa17.06■□□□□ 0.32
SIPA1-201ENST00000394224 ZNF839A8K0R7 811 aa17.06■□□□□ 0.32
SIPA1-201ENST00000394224 H3BNX3 289 aa17.06■□□□□ 0.32
SIPA1-201ENST00000394224 TRIM13O60858 407 aa17.06■□□□□ 0.32
SIPA1-201ENST00000394224 GP5P40197 560 aa17.06■□□□□ 0.32
SIPA1-201ENST00000394224 YAP1P46937 504 aaKnown RBP17.06■□□□□ 0.32
SIPA1-201ENST00000394224 SERPINB9P50453 376 aa17.06■□□□□ 0.32
SIPA1-201ENST00000394224 PDK2Q15119 407 aa17.06■□□□□ 0.32
SIPA1-201ENST00000394224 CATSPER4Q7RTX7 472 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms