RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 NNMTP40261 264 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 ABCG1P45844 678 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 NUCB2P80303 420 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 SULT2A1Q06520 285 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 KCNH2Q12809 1159 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 SLC45A4Q5BKX6 768 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 C6orf118Q5T5N4 469 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 HES3Q5TGS1 186 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 MFSD2AQ8NA29 543 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 PIP4K2CQ8TBX8 421 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 ALG14Q96F25 216 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 TIGD1Q96MW7 591 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 MED15Q96RN5 788 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 INTS2Q9H0H0 1204 aaKnown RBP14.21□□□□□ -0.13
CXCL12-202ENST00000374426 KDM4CQ9H3R0 1056 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 THAP9Q9H5L6 903 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 ACP6Q9NPH0 428 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.21□□□□□ -0.13
CXCL12-202ENST00000374426 ATMQ13315 3056 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 DOCK9Q9BZ29 2069 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 A0A1B0GVM2 712 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 TCAF2A6NFQ2 919 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 PPP1R3GB7ZBB8 358 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 SLC7A4O43246 635 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 PLRG1O43660 514 aaKnown RBP14.2□□□□□ -0.14
CXCL12-202ENST00000374426 TLX3O43711 291 aaPredicted RBP14.2□□□□□ -0.14
CXCL12-202ENST00000374426 MAT2AP31153 395 aaKnown RBP14.2□□□□□ -0.14
CXCL12-202ENST00000374426 PPP1R2P41236 205 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 VASPP50552 380 aaPredicted RBP14.2□□□□□ -0.14
CXCL12-202ENST00000374426 SEMG2Q02383 582 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 CENPCQ03188 943 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 PDCLQ13371 301 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 TTC39BQ5VTQ0 682 aaPredicted RBP14.2□□□□□ -0.14
CXCL12-202ENST00000374426 AGBL4Q5VU57 503 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 FBXL22Q6P050 247 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 FOXR2Q6PJQ5 311 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 IQCHQ86VS3 1027 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 OXR1Q8N573 874 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 ATP6V0D2Q8N8Y2 350 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 OR52K2Q8NGK3 314 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 NELFBQ8WX92 580 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 ZNF606Q8WXB4 792 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 UBE2TQ9NPD8 197 aaPredicted RBP14.2□□□□□ -0.14
CXCL12-202ENST00000374426 HOOK1Q9UJC3 728 aaKnown RBP14.2□□□□□ -0.14
CXCL12-202ENST00000374426 PPM1HQ9ULR3 514 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 ZNF462Q96JM2 2506 aa14.2□□□□□ -0.14
CXCL12-202ENST00000374426 ASH1LQ9NR48 2969 aaKnown RBP14.2□□□□□ -0.14
CXCL12-202ENST00000374426 EIF4E1BA6NMX2 242 aaKnown RBP14.19□□□□□ -0.14
CXCL12-202ENST00000374426 THAP12O43422 761 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 MED7O43513 233 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 ATP9BO43861 1147 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 AFPP02771 609 aaKnown RBP14.19□□□□□ -0.14
CXCL12-202ENST00000374426 CKMT2P17540 419 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 EIF2S3P41091 472 aaKnown RBP14.19□□□□□ -0.14
CXCL12-202ENST00000374426 IRAK1P51617 712 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 MARSP56192 900 aaKnown RBP14.19□□□□□ -0.14
CXCL12-202ENST00000374426 CNTN1Q12860 1018 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 OVGP1Q12889 678 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 ILKQ13418 452 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 RTP5Q14D33 572 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 POM121L1PQ3SYA9 428 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 RABGAP1LQ5R372 815 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 DSG4Q86SJ6 1040 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 PRPF39Q86UA1 669 aaKnown RBP14.19□□□□□ -0.14
CXCL12-202ENST00000374426 TRIM69Q86WT6 500 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 OR8D1Q8WZ84 308 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 SLC2A13Q96QE2 648 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 NRSN2Q9GZP1 204 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 FAM204AQ9H8W3 233 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 DDIT4Q9NX09 232 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 SLC12A6Q9UHW9 1150 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 CTNND2Q9UQB3 1225 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 DMTF1Q9Y222 760 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 CA5BQ9Y2D0 317 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 OR51B4Q9Y5P0 310 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 AK5Q9Y6K8 562 aa14.19□□□□□ -0.14
CXCL12-202ENST00000374426 MYLKQ15746 1914 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 SYNJ2BP-COX16A0A087WUM0 186 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 BICDL2A1A5D9 508 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 MCF2LO15068 1137 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 SDC3O75056 442 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 SLC2A3P11169 496 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 GNA15P30679 374 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 CCR1P32246 355 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 NUDT1P36639 197 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 OXCT1P55809 520 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 CDK17Q00537 523 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 AUHQ13825 339 aaKnown RBP14.18□□□□□ -0.14
CXCL12-202ENST00000374426 DLG2Q15700 870 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 PROX2Q3B8N5 592 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 ACCSLQ4AC99 568 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 FAM46CQ5VWP2 391 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 Q6ZVU0 165 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 ELOA2Q8IYF1 753 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-202ENST00000374426 DEFB106AQ8N104 65 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 WDTC1Q8N5D0 677 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 RPRD1AQ96P16 312 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-202ENST00000374426 UBL7Q96S82 380 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-202ENST00000374426 CPXM1Q96SM3 734 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 FEM1AQ9BSK4 669 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms