RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SYCE2Q6PIF2 218 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 ZDHHC24Q6UX98 284 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 SYDE1Q6ZW31 735 aaPredicted RBP15.07■□□□□ 0
CXCL12-201ENST00000343575 LGI2Q8N0V4 545 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 CFAP52Q8N1V2 620 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 LEMD2Q8NC56 503 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 ZSCAN18Q8TBC5 510 aaPredicted RBP15.07■□□□□ 0
CXCL12-201ENST00000343575 RTP4Q96DX8 246 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 GCNAQ96QF7 691 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 RAB17Q9H0T7 212 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 NSUN3Q9H649 340 aaKnown RBP15.07■□□□□ 0
CXCL12-201ENST00000343575 TASP1Q9H6P5 420 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 CNOT10Q9H9A5 744 aaKnown RBP15.07■□□□□ 0
CXCL12-201ENST00000343575 SFXN1Q9H9B4 322 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 ZDHHC18Q9NUE0 388 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 TMEM248Q9NWD8 314 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 MCM8Q9UJA3 840 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 PLAAQ9Y263 795 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 CLGNO14967 610 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 IFNB1P01574 187 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 RHOQP17081 205 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 CEBPBP17676 345 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 STIP1P31948 543 aaKnown RBP15.06■□□□□ 0
CXCL12-201ENST00000343575 SLC11A2P49281 568 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 VPS41P49754 854 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 RPS24P62847 133 aaKnown RBP15.06■□□□□ 0
CXCL12-201ENST00000343575 GALNT2Q10471 571 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 IFT88Q13099 833 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 CBX2Q14781 532 aaPredicted RBP15.06■□□□□ 0
CXCL12-201ENST00000343575 ACBD5Q5T8D3 534 aaPredicted RBP15.06■□□□□ 0
CXCL12-201ENST00000343575 ARHGAP36Q6ZRI8 547 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 HTR3DQ70Z44 454 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 GSTA5Q7RTV2 222 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 TFAP2DQ7Z6R9 452 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 FAM217AQ8IXS0 508 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 USP13Q92995 863 aaPredicted RBP15.06■□□□□ 0
CXCL12-201ENST00000343575 RPRD1AQ96P16 312 aaPredicted RBP15.06■□□□□ 0
CXCL12-201ENST00000343575 SLC39A8Q9C0K1 460 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 ADAM7Q9H2U9 754 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 RABEP2Q9H5N1 569 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 CATSPERBQ9H7T0 1116 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 SLC40A1Q9NP59 571 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 ARHGAP26Q9UNA1 814 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 COLQQ9Y215 455 aaPredicted RBP15.06■□□□□ 0
CXCL12-201ENST00000343575 HELZP42694 1942 aaKnown RBP15.06■□□□□ 0
CXCL12-201ENST00000343575 C5orf42Q9H799 3197 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 LEFTY2O00292 366 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 PRAMEF12O95522 483 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 FAM153BP0C7A2 387 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 DDX6P26196 483 aaKnown RBP eCLIP15.06■□□□□ 0
CXCL12-201ENST00000343575 RPL22P35268 128 aaKnown RBP15.06■□□□□ 0
CXCL12-201ENST00000343575 FAM153CQ494X1 144 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 UMODL1-AS1Q8N2C9 162 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 EFHBQ8N7U6 833 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 OR52K2Q8NGK3 314 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 DEPDC1BQ8WUY9 529 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 ING5Q8WYH8 240 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 APOL5Q9BWW9 433 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 PCDH9Q9HC56 1237 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 CFAP97Q9P2B7 532 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 FAM153AQ9UHL3 310 aa15.06■□□□□ 0
CXCL12-201ENST00000343575 ZFP37Q9Y6Q3 630 aaPredicted RBP15.06■□□□□ 0
CXCL12-201ENST00000343575 NYNRINQ9P2P1 1898 aaKnown RBP15.05■□□□□ -0
CXCL12-201ENST00000343575 CHD5Q8TDI0 1954 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 SOBPA7XYQ1 873 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 HACD1B0YJ81 288 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 F5H5T6 163 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 KCNN4O15554 427 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 LATS1O95835 1130 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 EZRP15311 586 aaKnown RBP15.05■□□□□ -0
CXCL12-201ENST00000343575 GARSP41250 739 aaKnown RBP15.05■□□□□ -0
CXCL12-201ENST00000343575 PPIDQ08752 370 aaKnown RBP15.05■□□□□ -0
CXCL12-201ENST00000343575 ADAM15Q13444 863 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 ADGRE1Q14246 886 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 GRIN2CQ14957 1233 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 PDK1Q15118 436 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 RARS2Q5T160 578 aaKnown RBP15.05■□□□□ -0
CXCL12-201ENST00000343575 BZW1Q7L1Q6 419 aaKnown RBP15.05■□□□□ -0
CXCL12-201ENST00000343575 TFB1MQ8WVM0 346 aaKnown RBP15.05■□□□□ -0
CXCL12-201ENST00000343575 RSAD2Q8WXG1 361 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 CENPTQ96BT3 561 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 SGSM3Q96HU1 749 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 CLEC1BQ9P126 229 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 ASIC3Q9UHC3 531 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 RAD54BQ9Y620 910 aa15.05■□□□□ -0
CXCL12-201ENST00000343575 CLUHO75153 1309 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 SERPINB6P35237 376 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 EIF3BP55884 814 aaKnown RBP15.04■□□□□ -0
CXCL12-201ENST00000343575 DLX2Q07687 328 aaPredicted RBP15.04■□□□□ -0
CXCL12-201ENST00000343575 WASHC5Q12768 1159 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 ANKRD54Q6NXT1 300 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 ELMSAN1Q6PJG2 1045 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 GPR149Q86SP6 731 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 CDKL3Q8IVW4 592 aaPredicted RBP15.04■□□□□ -0
CXCL12-201ENST00000343575 BBS7Q8IWZ6 715 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 PARP9Q8IXQ6 854 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 CACNA2D3Q8IZS8 1091 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 CCDC89Q8N998 374 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 FBXO25Q8TCJ0 367 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 SH3RF2Q8TEC5 729 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms