RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 RNASEH2AO75792 299 aaKnown RBP18.24■□□□□ 0.51
HDDC3-201ENST00000330334 ENDOD1O94919 500 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 CYP1A1P04798 512 aaPredicted RBP18.24■□□□□ 0.51
HDDC3-201ENST00000330334 MMEP08473 750 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 TFE3P19532 575 aaPredicted RBP18.24■□□□□ 0.51
HDDC3-201ENST00000330334 SULT1E1P49888 294 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 IRAK1P51617 712 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 CCR5P51681 352 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 JAM2P57087 298 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 RACK1P63244 317 aaKnown RBP18.24■□□□□ 0.51
HDDC3-201ENST00000330334 TRIP6Q15654 476 aaKnown RBP18.24■□□□□ 0.51
HDDC3-201ENST00000330334 ST3GAL2Q16842 350 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 KIF19Q2TAC6 998 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 SASS6Q6UVJ0 657 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 LRRC31Q6UY01 552 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 DSG4Q86SJ6 1040 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 GLRX5Q86SX6 157 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 NAXDQ8IW45 347 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 OR52K2Q8NGK3 314 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 CPA5Q8WXQ8 436 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 TBCBQ99426 244 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 KDM4CQ9H3R0 1056 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 TM7SF3Q9NS93 570 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 SLC25A13Q9UJS0 675 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 VPS28Q9UK41 221 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 ANKRD6Q9Y2G4 727 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 SIK3Q9Y2K2 1263 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 SLCO1B1Q9Y6L6 691 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 FAM221BA6H8Z2 402 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 ALOX15BO15296 676 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 DFNA5O60443 496 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 PROS1P07225 676 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 MMP8P22894 467 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 SOX5P35711 763 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 FLT3P36888 993 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 POLR2FP61218 127 aaKnown RBP18.23■□□□□ 0.51
HDDC3-201ENST00000330334 FAM193AP78312 1265 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 KRT83P78385 493 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 FAM46CQ5VWP2 391 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 NAA35Q5VZE5 725 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 NCEH1Q6PIU2 408 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 TRIM72Q6ZMU5 477 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 AADATQ8N5Z0 425 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 ANKRD20A12PQ8NF67 263 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 SCNM1Q9BWG6 230 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 IL21RQ9HBE5 538 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 FAM207AQ9NSI2 230 aaPredicted RBP18.23■□□□□ 0.51
HDDC3-201ENST00000330334 LIMA1Q9UHB6 759 aaKnown RBP18.23■□□□□ 0.51
HDDC3-201ENST00000330334 PPM1HQ9ULR3 514 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 HS3ST2Q9Y278 367 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 FNDC3AQ9Y2H6 1198 aaKnown RBP18.23■□□□□ 0.51
HDDC3-201ENST00000330334 NEUROG3Q9Y4Z2 214 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 PCDHB9Q9Y5E1 797 aa18.23■□□□□ 0.51
HDDC3-201ENST00000330334 MCF2LO15068 1137 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 VILLO15195 856 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 SLC7A4O43246 635 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 CNTN5O94779 1100 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 GFPT2O94808 682 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 IL1BP01584 269 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 CHRNB2P17787 502 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 PSMD8P48556 350 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 MYL5Q02045 173 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 SUZ12Q15022 739 aaKnown RBP18.22■□□□□ 0.51
HDDC3-201ENST00000330334 DLG2Q15700 870 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 ALFQ53S48 1182 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 ARTNQ5T4W7 220 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 TRNP1Q6NT89 227 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 ZNF783Q6ZMS7 281 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 SH2D3CQ8N5H7 860 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 OR8D1Q8WZ84 308 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 SKA1Q96BD8 255 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 CAMK1GQ96NX5 476 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 C2orf49Q9BVC5 232 aaPredicted RBP18.22■□□□□ 0.51
HDDC3-201ENST00000330334 MUC3BQ9H195 1237 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 RETREG1Q9H6L5 497 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 PCOLCE2Q9UKZ9 415 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 SNX11Q9Y5W9 270 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 CABIN1Q9Y6J0 2220 aa18.22■□□□□ 0.51
HDDC3-201ENST00000330334 ASPMQ8IZT6 3477 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 FLRT2O43155 660 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 PCDHGA12O60330 932 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 TOP3BO95985 862 aaKnown RBP18.21■□□□□ 0.51
HDDC3-201ENST00000330334 VAV1P15498 845 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 ZNF18P17022 549 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 DRD3P35462 400 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 GGCXP38435 758 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 STAT1P42224 750 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 CTSKP43235 329 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 KLK7P49862 253 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 CLCN6P51797 869 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 COPB1P53618 953 aaKnown RBP18.21■□□□□ 0.51
HDDC3-201ENST00000330334 ADPRHP54922 357 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 FMO1Q01740 532 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 STX1AQ16623 288 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 C2CD6Q53TS8 623 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 C6orf118Q5T5N4 469 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 RAB44Q7Z6P3 723 aaPredicted RBP18.21■□□□□ 0.51
HDDC3-201ENST00000330334 KDF1Q8NAX2 398 aaPredicted RBP18.21■□□□□ 0.51
HDDC3-201ENST00000330334 OR14C36Q8NHC7 312 aa18.21■□□□□ 0.51
HDDC3-201ENST00000330334 SLC20A1Q8WUM9 679 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms