RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 SLC10A4Q96EP9 437 aa18.05■□□□□ 0.48
CDKN1B-201ENST00000228872 TARS2Q9BW92 718 aaKnown RBP18.05■□□□□ 0.48
CDKN1B-201ENST00000228872 PAIP1Q9H074 479 aaKnown RBP18.05■□□□□ 0.48
CDKN1B-201ENST00000228872 SPATC1LQ9H0A9 340 aa18.05■□□□□ 0.48
CDKN1B-201ENST00000228872 LHX5Q9H2C1 402 aa18.05■□□□□ 0.48
CDKN1B-201ENST00000228872 CLK4Q9HAZ1 481 aaKnown RBP18.05■□□□□ 0.48
CDKN1B-201ENST00000228872 CDH7Q9ULB5 785 aa18.05■□□□□ 0.48
CDKN1B-201ENST00000228872 PLOD2O00469 737 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 MAFGO15525 162 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 CNMDO75829 334 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 PIGRP01833 764 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 DCDC5Q6ZRR9 648 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 SLC15A3Q8IY34 581 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 MYO1HQ8N1T3 1032 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 PQLC3Q8N755 202 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 ZSCAN18Q8TBC5 510 aaPredicted RBP18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 GPRASP2Q96D09 838 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 RRAGCQ9HB90 399 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 ANLNQ9NQW6 1124 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 PSMD12O00232 456 aaPredicted RBP18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 NEMP1O14524 444 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 APOL1O14791 398 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 TGM2P21980 687 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 BCAR1P56945 870 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 SETD3Q86TU7 594 aaPredicted RBP18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 DNERQ8NFT8 737 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 CDKL2Q92772 493 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 HNRNPABQ99729 332 aaKnown RBP18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 MTMR12Q9C0I1 747 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 PRDM16Q9HAZ2 1276 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 SEPT9Q9UHD8 586 aaPredicted RBP18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 SLC8A2Q9UPR5 921 aa18.04■□□□□ 0.48
CDKN1B-201ENST00000228872 ADGRA2Q96PE1 1338 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 ZNF701M0R085 212 aaPredicted RBP18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 ADAM23O75077 832 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 OCM2P0CE71 109 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 OCMP0CE72 109 aaPredicted RBP18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 ZNF12P17014 697 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 TCN1P20061 433 aaPredicted RBP18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 PROZP22891 400 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 TYK2P29597 1187 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 BCAP31P51572 246 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 LSM12Q3MHD2 195 aaKnown RBP18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 ZBED5Q49AG3 693 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 TNS4Q8IZW8 715 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 FAM156AQ8NDB6 213 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 RDM1Q8NG50 284 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 ADAM32Q8TC27 787 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 BRD8Q9H0E9 1235 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 TUT1Q9H6E5 874 aaKnown RBP18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 LRRC37A2A6NM11 1700 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 RBM47A0AV96 593 aaKnown RBP18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 HTR3EA5X5Y0 456 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 TMEM114B3SHH9 223 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 TMX2-CTNND1H3BSU7 103 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 RGS20O76081 388 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 CSPG5O95196 566 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 FUCA1P04066 466 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 ZNF24P17028 368 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 FGFR3P22607 806 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 IL4RP24394 825 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 ESRRGP62508 458 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 ART3Q13508 389 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 ZNF829Q3KNS6 432 aaPredicted RBP18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 CCDC153Q494R4 210 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 CPNE9Q8IYJ1 553 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 CPSF7Q8N684 471 aaKnown RBP18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 LRTOMTQ8WZ04 291 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 PPP1R36Q96LQ0 422 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 SLC29A1Q99808 456 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 HIPK3Q9H422 1215 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 PDZD7Q9H5P4 517 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 RMI1Q9H9A7 625 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 AP4S1Q9Y587 144 aa18.03■□□□□ 0.48
CDKN1B-201ENST00000228872 VAPBO95292 243 aa18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 KCNA2P16389 499 aa18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 RFTN1Q14699 578 aaPredicted RBP18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 STILQ15468 1287 aa18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 TMEM53Q6P2H8 277 aa18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 CASC4Q6P4E1 433 aa18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 ATP6V0A1Q93050 837 aa18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 MCRS1Q96EZ8 462 aa18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 ANKRD60Q9BZ19 345 aa18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 ZNF385DQ9H6B1 395 aa18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 GPATCH2LQ9NWQ4 482 aa18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 MTMR10Q9NXD2 777 aa18.02■□□□□ 0.48
CDKN1B-201ENST00000228872 SLC22A2O15244 555 aa18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 XPOTO43592 962 aaKnown RBP18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 EDN1P05305 212 aa18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 ZNF143P52747 638 aaPredicted RBP18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 CRADDP78560 199 aa18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 SP4Q02446 784 aa18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 TRPC3Q13507 836 aa18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 HERC3Q15034 1050 aa18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 SMAD1Q15797 465 aaKnown RBP18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 C4orf22Q6V702 233 aa18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 PTAR1Q7Z6K3 402 aaPredicted RBP18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 PLEKHA8Q96JA3 519 aa18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 PPP1R10Q96QC0 940 aaKnown RBP18.02■□□□□ 0.47
CDKN1B-201ENST00000228872 ADPGKQ9BRR6 497 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms