RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 ACSL1P33121 698 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 FLT3P36888 993 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 UAP1L1Q3KQV9 507 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 C9orf64Q5T6V5 341 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 LRRC31Q6UY01 552 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 APTXQ7Z2E3 356 aaKnown RBP18.75■□□□□ 0.59
VCX3A-203ENST00000612369 BNIPLQ7Z465 357 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 FAM124AQ86V42 546 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 CIR1Q86X95 450 aaPredicted RBP18.75■□□□□ 0.59
VCX3A-203ENST00000612369 DHX40Q8IX18 779 aaKnown RBP18.75■□□□□ 0.59
VCX3A-203ENST00000612369 HDDC3Q8N4P3 179 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 SLC20A1Q8WUM9 679 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 BPIFA3Q9BQP9 254 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 ADAM33Q9BZ11 813 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 SIK2Q9H0K1 926 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 HSD3B7Q9H2F3 369 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 MTG2Q9H4K7 406 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 SLCO3A1Q9UIG8 710 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 PCDH15Q96QU1 1955 aa18.75■□□□□ 0.59
VCX3A-203ENST00000612369 CACNA1EQ15878 2313 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 DRGXA6NNA5 263 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 TTC34A8MYJ7 566 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 OPHN1O60890 802 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 ENDOD1O94919 500 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 SEMA4FO95754 770 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 TFE3P19532 575 aaPredicted RBP18.74■□□□□ 0.59
VCX3A-203ENST00000612369 KCNA4P22459 653 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 MZF1P28698 734 aaPredicted RBP18.74■□□□□ 0.59
VCX3A-203ENST00000612369 NOVA1P51513 510 aaKnown RBP18.74■□□□□ 0.59
VCX3A-203ENST00000612369 CENPCQ03188 943 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 C2CD6Q53TS8 623 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 N4BP2L1Q5TBK1 243 aaPredicted RBP18.74■□□□□ 0.59
VCX3A-203ENST00000612369 SH3PXD2AQ5TCZ1 1133 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 PSAPL1Q6NUJ1 521 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 LRSAM1Q6UWE0 723 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 C14orf80Q86SX3 495 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 MINDY1Q8N5J2 469 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 ALG14Q96F25 216 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 RPL10LQ96L21 214 aaKnown RBP18.74■□□□□ 0.59
VCX3A-203ENST00000612369 HAPLN3Q96S86 360 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 FEM1AQ9BSK4 669 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 GTPBP2Q9BX10 602 aaKnown RBP18.74■□□□□ 0.59
VCX3A-203ENST00000612369 PABPC3Q9H361 631 aaKnown RBP18.74■□□□□ 0.59
VCX3A-203ENST00000612369 SLC32A1Q9H598 525 aa18.74■□□□□ 0.59
VCX3A-203ENST00000612369 DNAAF2Q9NVR5 837 aaKnown RBP18.74■□□□□ 0.59
VCX3A-203ENST00000612369 ASCC3Q8N3C0 2202 aaKnown RBP18.73■□□□□ 0.59
VCX3A-203ENST00000612369 BCAT2O15382 392 aaPredicted RBP18.73■□□□□ 0.59
VCX3A-203ENST00000612369 CCDC172P0C7W6 258 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 UNGP13051 313 aaPredicted RBP18.73■□□□□ 0.59
VCX3A-203ENST00000612369 RDXP35241 583 aaKnown RBP18.73■□□□□ 0.59
VCX3A-203ENST00000612369 SEMA3BQ13214 749 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 SLC14A1Q13336 389 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 CST6Q15828 149 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 SETD3Q86TU7 594 aaPredicted RBP18.73■□□□□ 0.59
VCX3A-203ENST00000612369 ZCCHC9Q8N567 271 aaKnown RBP18.73■□□□□ 0.59
VCX3A-203ENST00000612369 AOPEPQ8N6M6 819 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 PTPRN2Q92932 1015 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 MIR1-1HGQ9H1L0 117 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 C6orf106Q9H6K1 298 aaPredicted RBP18.73■□□□□ 0.59
VCX3A-203ENST00000612369 OSGEPQ9NPF4 335 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 ANLNQ9NQW6 1124 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 METTL5Q9NRN9 209 aaKnown RBP18.73■□□□□ 0.59
VCX3A-203ENST00000612369 FBXL12Q9NXK8 326 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 EIF2B4Q9UI10 523 aaKnown RBP18.73■□□□□ 0.59
VCX3A-203ENST00000612369 SLC25A13Q9UJS0 675 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 FZD4Q9ULV1 537 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.73■□□□□ 0.59
VCX3A-203ENST00000612369 OR51B4Q9Y5P0 310 aa18.73■□□□□ 0.59
VCX3A-203ENST00000612369 ADAMTS9Q9P2N4 1935 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 IGLV3-10A0A075B6K4 115 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 SMTNL1A8MU46 457 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 ADH1BP00325 375 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 NSFP46459 744 aaKnown RBP18.72■□□□□ 0.59
VCX3A-203ENST00000612369 GSCP56915 257 aaPredicted RBP18.72■□□□□ 0.59
VCX3A-203ENST00000612369 ELAVL3Q14576 367 aaKnown RBP18.72■□□□□ 0.59
VCX3A-203ENST00000612369 ANO6Q4KMQ2 910 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 MMAAQ8IVH4 418 aaKnown RBP18.72■□□□□ 0.59
VCX3A-203ENST00000612369 ZNF683Q8IZ20 524 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 C1orf216Q8TAB5 229 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 CFAP57Q96MR6 1250 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 FAM129BQ96TA1 746 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 FSCN3Q9NQT6 498 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 ADAMTS1Q9UHI8 967 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 VPS28Q9UK41 221 aa18.72■□□□□ 0.59
VCX3A-203ENST00000612369 I6L893 689 aaPredicted RBP18.71■□□□□ 0.59
VCX3A-203ENST00000612369 ATP9BO43861 1147 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 CNTN5O94779 1100 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 ATP1A3P13637 1013 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 C5AR1P21730 350 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 PMLP29590 882 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 SLC8A1P32418 973 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 GGCXP38435 758 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 STK19P49842 368 aaPredicted RBP18.71■□□□□ 0.59
VCX3A-203ENST00000612369 IRAK1P51617 712 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 KRT83P78385 493 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 GRIK2Q13002 908 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 TRNP1Q6NT89 227 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 IL27RAQ6UWB1 636 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 DSG4Q86SJ6 1040 aa18.71■□□□□ 0.59
VCX3A-203ENST00000612369 PIP4P1Q86T03 277 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms