RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TMEM248Q9NWD8 314 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 CACNA2D2Q9NY47 1150 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 ZNF212Q9UDV6 495 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 PCSK1NQ9UHG2 260 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 AP4E1Q9UPM8 1137 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 EPN1Q9Y6I3 576 aaPredicted RBP26.48■■□□□ 1.83
TRIM28-204ENST00000594806 ILVBLA1L0T0 632 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 FAM72CH0Y354 149 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 MTA2O94776 668 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 IPO7O95373 1038 aaKnown RBP26.47■■□□□ 1.83
TRIM28-204ENST00000594806 HOXC13P31276 330 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 NBL1P41271 181 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 ARHGAP25P42331 645 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 IL12RB1P42701 662 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 MAGEA1P43355 309 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 GSDMDP57764 484 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 ECT2LQ008S8 904 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 PTPRNQ16849 979 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 FAM72AQ5TYM5 149 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 FAM72DQ6L9T8 149 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 RWDD4Q6NW29 188 aaKnown RBP26.47■■□□□ 1.83
TRIM28-204ENST00000594806 FAM72BQ86X60 149 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 SPC24Q8NBT2 197 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 SLC35G2Q8TBE7 412 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 SORCS1Q8WY21 1168 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 RFFLQ8WZ73 363 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 ALG14Q96F25 216 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 BAG1Q99933 345 aaPredicted RBP26.47■■□□□ 1.83
TRIM28-204ENST00000594806 TMEM245Q9H330 911 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 CATSPERBQ9H7T0 1116 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 SUN2Q9UH99 717 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 OR51B4Q9Y5P0 310 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 CKAP5Q14008 2032 aa26.47■■□□□ 1.83
TRIM28-204ENST00000594806 SYNCRIPO60506 623 aaKnown RBP26.46■■□□□ 1.83
TRIM28-204ENST00000594806 LILRB5O75023 590 aa26.46■■□□□ 1.83
TRIM28-204ENST00000594806 MZF1P28698 734 aaPredicted RBP26.46■■□□□ 1.83
TRIM28-204ENST00000594806 ETFBP38117 255 aa26.46■■□□□ 1.83
TRIM28-204ENST00000594806 KRT83P78385 493 aa26.46■■□□□ 1.83
TRIM28-204ENST00000594806 NHLH1Q02575 133 aa26.46■■□□□ 1.83
TRIM28-204ENST00000594806 HADHQ16836 314 aaKnown RBP26.46■■□□□ 1.83
TRIM28-204ENST00000594806 FNDC3BQ53EP0 1204 aaKnown RBP26.46■■□□□ 1.83
TRIM28-204ENST00000594806 RNF219Q5W0B1 726 aaPredicted RBP26.46■■□□□ 1.83
TRIM28-204ENST00000594806 TFAP2DQ7Z6R9 452 aa26.46■■□□□ 1.83
TRIM28-204ENST00000594806 NLRP14Q86W24 1093 aa26.46■■□□□ 1.83
TRIM28-204ENST00000594806 APCDD1Q8J025 514 aa26.46■■□□□ 1.83
TRIM28-204ENST00000594806 CYB5D2Q8WUJ1 264 aa26.46■■□□□ 1.83
TRIM28-204ENST00000594806 SNRNP25Q9BV90 132 aaKnown RBP26.46■■□□□ 1.83
TRIM28-204ENST00000594806 MUC3BQ9H195 1237 aa26.46■■□□□ 1.83
TRIM28-204ENST00000594806 POLR3BQ9NW08 1133 aaPredicted RBP26.46■■□□□ 1.83
TRIM28-204ENST00000594806 ERVW-1Q9UQF0 538 aa26.46■■□□□ 1.83
TRIM28-204ENST00000594806 A0A1W2PQF6 199 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 AXIN1O15169 862 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 FGF10O15520 208 aaPredicted RBP26.45■■□□□ 1.82
TRIM28-204ENST00000594806 CREB3O43889 395 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 PROSCO94903 275 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 NDUFA10O95299 355 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 EPHB2P29323 1055 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 MAN1A1P33908 653 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 NNMTP40261 264 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 WASP42768 502 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 FNTBP49356 437 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 CYP4V2Q6ZWL3 525 aaPredicted RBP26.45■■□□□ 1.82
TRIM28-204ENST00000594806 PYROXD2Q8N2H3 581 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 TEKT4Q8WW24 435 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 BTBD6Q96KE9 485 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 PEBP4Q96S96 227 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 C2orf49Q9BVC5 232 aaPredicted RBP26.45■■□□□ 1.82
TRIM28-204ENST00000594806 DHX35Q9H5Z1 703 aaKnown RBP26.45■■□□□ 1.82
TRIM28-204ENST00000594806 FBRSQ9HAH7 460 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 VPS28Q9UK41 221 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 NEU3Q9UQ49 428 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 PCDHA13Q9Y5I0 950 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 CHD5Q8TDI0 1954 aa26.45■■□□□ 1.82
TRIM28-204ENST00000594806 MUC22E2RYF6 1773 aaPredicted RBP26.44■■□□□ 1.82
TRIM28-204ENST00000594806 CXorf51AA0A1B0GTR3 108 aa26.44■■□□□ 1.82
TRIM28-204ENST00000594806 GOLGA6L3A6NEY3 463 aa26.44■■□□□ 1.82
TRIM28-204ENST00000594806 WASH4PA8MWX3 477 aa26.44■■□□□ 1.82
TRIM28-204ENST00000594806 WASH3PC4AMC7 463 aa26.44■■□□□ 1.82
TRIM28-204ENST00000594806 HCAR3P49019 387 aa26.44■■□□□ 1.82
TRIM28-204ENST00000594806 TPI1P60174 286 aa26.44■■□□□ 1.82
TRIM28-204ENST00000594806 DCAF4L2Q8NA75 395 aa26.44■■□□□ 1.82
TRIM28-204ENST00000594806 OR52K2Q8NGK3 314 aa26.44■■□□□ 1.82
TRIM28-204ENST00000594806 MAGEB5Q9BZ81 275 aa26.44■■□□□ 1.82
TRIM28-204ENST00000594806 CD248Q9HCU0 757 aa26.44■■□□□ 1.82
TRIM28-204ENST00000594806 TCRBV21S2A2A0A5A6 115 aa26.43■■□□□ 1.82
TRIM28-204ENST00000594806 SOWAHDA6NJG2 315 aa26.43■■□□□ 1.82
TRIM28-204ENST00000594806 PROB1E7EW31 1015 aa26.43■■□□□ 1.82
TRIM28-204ENST00000594806 EPHX1P07099 455 aa26.43■■□□□ 1.82
TRIM28-204ENST00000594806 GNA12Q03113 381 aa26.43■■□□□ 1.82
TRIM28-204ENST00000594806 HEATR6Q6AI08 1181 aaKnown RBP26.43■■□□□ 1.82
TRIM28-204ENST00000594806 ANO7Q6IWH7 933 aa26.43■■□□□ 1.82
TRIM28-204ENST00000594806 RTL3Q8N8U3 475 aaKnown RBP26.43■■□□□ 1.82
TRIM28-204ENST00000594806 MRGPRX3Q96LB0 322 aa26.43■■□□□ 1.82
TRIM28-204ENST00000594806 MAGEH1Q9H213 219 aa26.43■■□□□ 1.82
TRIM28-204ENST00000594806 GRPEL1Q9HAV7 217 aa26.43■■□□□ 1.82
TRIM28-204ENST00000594806 OSGEPQ9NPF4 335 aa26.43■■□□□ 1.82
TRIM28-204ENST00000594806 SLC25A13Q9UJS0 675 aa26.43■■□□□ 1.82
TRIM28-204ENST00000594806 PRKCHP24723 683 aa26.42■■□□□ 1.82
TRIM28-204ENST00000594806 HADHBP55084 474 aaKnown RBP26.42■■□□□ 1.82
TRIM28-204ENST00000594806 SLC25A11Q02978 314 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms