RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 HDCP19113 662 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 TPSB2P20231 275 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 CCNCP24863 283 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 NDST2P52849 883 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 SMAD3P84022 425 aaKnown RBP11.69□□□□□ -0.54
SMAD4-205ENST00000588745 GAD2Q05329 585 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 ZBTB17Q13105 803 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 TPSAB1Q15661 275 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 RAB30Q15771 203 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 HSP90B2PQ58FF3 399 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 RABGAP1LQ5R372 815 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 DENND2CQ68D51 928 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 PPP1R21Q6ZMI0 780 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 ARHGAP36Q6ZRI8 547 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 CIR1Q86X95 450 aaPredicted RBP11.69□□□□□ -0.54
SMAD4-205ENST00000588745 LRRC49Q8IUZ0 686 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 KRT222Q8N1A0 295 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 ARL14EPQ8N8R7 260 aaPredicted RBP11.69□□□□□ -0.54
SMAD4-205ENST00000588745 WBP2Q969T9 261 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 MYEOVQ96EZ4 313 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 PRICKLE1Q96MT3 831 aaPredicted RBP11.69□□□□□ -0.54
SMAD4-205ENST00000588745 CYP2S1Q96SQ9 504 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 VAT1Q99536 393 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 FRMD8Q9BZ67 464 aaPredicted RBP11.69□□□□□ -0.54
SMAD4-205ENST00000588745 LMAN2LQ9H0V9 348 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 NKX2-4Q9H2Z4 354 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 RETREG1Q9H6L5 497 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 NOL6Q9H6R4 1146 aaKnown RBP11.69□□□□□ -0.54
SMAD4-205ENST00000588745 ETNK1Q9HBU6 452 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 SAYSD1Q9NPB0 183 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 MED4Q9NPJ6 270 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 NINJ2Q9NZG7 142 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 KLHL8Q9P2G9 620 aaPredicted RBP11.69□□□□□ -0.54
SMAD4-205ENST00000588745 IGSF9Q9P2J2 1179 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 DPP7Q9UHL4 492 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 MSRAQ9UJ68 235 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 STOML2Q9UJZ1 356 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 AGO1Q9UL18 857 aaKnown RBP11.69□□□□□ -0.54
SMAD4-205ENST00000588745 SHROOM3Q8TF72 1996 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 TRAV19A0A0A6YYK7 116 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.68□□□□□ -0.54
SMAD4-205ENST00000588745 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.68□□□□□ -0.54
SMAD4-205ENST00000588745 RASA4BC9J798 803 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 E7ESA3 106 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 H0YGN5 161 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 RASA4O43374 803 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 MAFKO60675 156 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 XYLBO75191 536 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 APRTP07741 180 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 POU2F2P09086 479 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 PSMB4P28070 264 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 MAGEA4P43358 317 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 PAPOLAP51003 745 aaKnown RBP11.68□□□□□ -0.54
SMAD4-205ENST00000588745 IFI35P80217 286 aaPredicted RBP11.68□□□□□ -0.54
SMAD4-205ENST00000588745 SLC7A9P82251 487 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 PDIA2Q13087 525 aaKnown RBP11.68□□□□□ -0.54
SMAD4-205ENST00000588745 PARP6Q2NL67 630 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 ADGRF1Q5T601 910 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 UBAP2Q5T6F2 1119 aaKnown RBP11.68□□□□□ -0.54
SMAD4-205ENST00000588745 PPP2R2DQ66LE6 453 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 ITPRIPL1Q6GPH6 555 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 TIGD7Q6NT04 549 aaPredicted RBP11.68□□□□□ -0.54
SMAD4-205ENST00000588745 RFWD3Q6PCD5 774 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 ELMSAN1Q6PJG2 1045 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 ADGRD2Q7Z7M1 963 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 PDIK1LQ8N165 341 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 MAB21L3Q8N8X9 362 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 LEMD2Q8NC56 503 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 MCUQ8NE86 351 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 SHKBP1Q8TBC3 707 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 ADAMTS19Q8TE59 1207 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 SH3GL2Q99962 352 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 DDX50Q9BQ39 737 aaKnown RBP11.68□□□□□ -0.54
SMAD4-205ENST00000588745 GBA3Q9H227 469 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 CERS4Q9HA82 394 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 EIF2B3Q9NR50 452 aaKnown RBP11.68□□□□□ -0.54
SMAD4-205ENST00000588745 HCFC1R1Q9NWW0 138 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 ZDHHC7Q9NXF8 308 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 LSM7Q9UK45 103 aaKnown RBP11.68□□□□□ -0.54
SMAD4-205ENST00000588745 TRHDEQ9UKU6 1024 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 HCFC2Q9Y5Z7 792 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 NFS1Q9Y697 457 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 NUP205Q92621 2012 aa11.68□□□□□ -0.54
SMAD4-205ENST00000588745 ARHGAP42A6NI28 874 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 E7EVH7 732 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 NRG2O14511 850 aaPredicted RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 OPA1O60313 960 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 GREM1O60565 184 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 RAMP2O60895 175 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 TTC4O95801 387 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 SYF2O95926 243 aaKnown RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 GJA1P17302 382 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 PTPN2P17706 415 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 DDX6P26196 483 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 OAS2P29728 719 aaKnown RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CCR2P41597 374 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 CDH4P55283 916 aa11.67□□□□□ -0.54
SMAD4-205ENST00000588745 EIF3BP55884 814 aaKnown RBP11.67□□□□□ -0.54
SMAD4-205ENST00000588745 YBEYP58557 167 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms