RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 CLDN6P56747 220 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 PPP2CBP62714 309 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 PPP2CAP67775 309 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 CENPCQ03188 943 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 PDCLQ13371 301 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 ARID5BQ14865 1188 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 TAF5Q15542 800 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 ARHGAP44Q17R89 818 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 SND1Q7KZF4 910 aaKnown RBP eCLIP12.77□□□□□ -0.37
POLR2A-202ENST00000573603 BEND5Q7L4P6 421 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 CREBRFQ8IUR6 639 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 PASD1Q8IV76 773 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 CCAR2Q8N163 923 aaKnown RBP12.77□□□□□ -0.37
POLR2A-202ENST00000573603 ATP6V0D2Q8N8Y2 350 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 KDM1BQ8NB78 822 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 STK32AQ8WU08 396 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 HNRNPLLQ8WVV9 542 aaKnown RBP12.77□□□□□ -0.37
POLR2A-202ENST00000573603 ZNF606Q8WXB4 792 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 PTPRN2Q92932 1015 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 SKA1Q96BD8 255 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 SERAC1Q96JX3 654 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 MED15Q96RN5 788 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 FAM129BQ96TA1 746 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 ELF4Q99607 663 aaPredicted RBP12.77□□□□□ -0.37
POLR2A-202ENST00000573603 CRACR2AQ9BSW2 395 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 DDIT4Q9NX09 232 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.37
POLR2A-202ENST00000573603 NBEAQ8NFP9 2946 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 TRABD2BA6NFA1 517 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 KCNU1A8MYU2 1149 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 DFNA5O60443 496 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 GADD45BO75293 160 aaPredicted RBP12.76□□□□□ -0.37
POLR2A-202ENST00000573603 GRAP2O75791 330 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 ADH1BP00325 375 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 ITGAVP06756 1048 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 GOT1P17174 413 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 C5AR1P21730 350 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 NNMTP40261 264 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 MARSP56192 900 aaKnown RBP12.76□□□□□ -0.37
POLR2A-202ENST00000573603 YWHAZP63104 245 aaKnown RBP12.76□□□□□ -0.37
POLR2A-202ENST00000573603 APBA1Q02410 837 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 CYP4F3Q08477 520 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 ELAVL3Q14576 367 aaKnown RBP12.76□□□□□ -0.37
POLR2A-202ENST00000573603 POM121L1PQ3SYA9 428 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 RABGAP1LQ5R372 815 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 TRIM65Q6PJ69 517 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 FOXR2Q6PJQ5 311 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.76□□□□□ -0.37
POLR2A-202ENST00000573603 TMEM110Q86TL2 294 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 PDZD3Q86UT5 571 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 ELOA2Q8IYF1 753 aaPredicted RBP12.76□□□□□ -0.37
POLR2A-202ENST00000573603 DEFB106AQ8N104 65 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 RNF34Q969K3 372 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 CNDP2Q96KP4 475 aaKnown RBP12.76□□□□□ -0.37
POLR2A-202ENST00000573603 RPRD1AQ96P16 312 aaPredicted RBP12.76□□□□□ -0.37
POLR2A-202ENST00000573603 CPXM1Q96SM3 734 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 PRMT1Q99873 361 aaKnown RBP12.76□□□□□ -0.37
POLR2A-202ENST00000573603 THAP9Q9H5L6 903 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 GDF3Q9NR23 364 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 SLC12A6Q9UHW9 1150 aa12.76□□□□□ -0.37
POLR2A-202ENST00000573603 TBC1D3DA0A087WVF3 549 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 TBC1D3IA0A087WXS9 549 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 TBC1D3EA0A087X179 549 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 TBC1D3KA0A087X1G2 549 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 A0A1B0GVM2 712 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 A0A1W2PR77 199 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 TBC1D3FA6NER0 549 aaPredicted RBP12.75□□□□□ -0.37
POLR2A-202ENST00000573603 TCAF2A6NFQ2 919 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 BECN2A8MW95 431 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 TBC1D3LB9A6J9 549 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 ENC1O14682 589 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 BNIP3LO60238 219 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 TBC1D3HP0C7X1 549 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 MAT2AP31153 395 aaKnown RBP12.75□□□□□ -0.37
POLR2A-202ENST00000573603 DRD3P35462 400 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 IRAK1P51617 712 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 CCR5P51681 352 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 CDK17Q00537 523 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 DNAJC3Q13217 504 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 ITPR1Q14643 2758 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 SHBQ15464 509 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 SMAD1Q15797 465 aaKnown RBP12.75□□□□□ -0.37
POLR2A-202ENST00000573603 MEA1Q16626 185 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 ACCSLQ4AC99 568 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 TTC39BQ5VTQ0 682 aaPredicted RBP12.75□□□□□ -0.37
POLR2A-202ENST00000573603 TBC1D3GQ6DHY5 549 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 TBC1D3CQ6IPX1 549 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 CXorf57Q6NSI4 855 aaKnown RBP12.75□□□□□ -0.37
POLR2A-202ENST00000573603 TBC1D3Q8IZP1 549 aaPredicted RBP12.75□□□□□ -0.37
POLR2A-202ENST00000573603 EID2Q8N6I1 236 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.75□□□□□ -0.37
POLR2A-202ENST00000573603 CHMP5Q9NZZ3 219 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 SLC25A13Q9UJS0 675 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 CABIN1Q9Y6J0 2220 aa12.75□□□□□ -0.37
POLR2A-202ENST00000573603 ANKRD11Q6UB99 2663 aaPredicted RBP12.75□□□□□ -0.37
POLR2A-202ENST00000573603 KNL1Q8NG31 2342 aa12.74□□□□□ -0.37
POLR2A-202ENST00000573603 RTN2O75298 545 aa12.74□□□□□ -0.37
POLR2A-202ENST00000573603 FGFR1OPO95684 399 aaKnown RBP12.74□□□□□ -0.37
POLR2A-202ENST00000573603 LDOC1O95751 146 aaPredicted RBP12.74□□□□□ -0.37
POLR2A-202ENST00000573603 SLC9A1P19634 815 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms