RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 LAYNQ6UX15 382 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 DENND6AQ8IWF6 608 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 NDNQ99608 321 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 DUSP16Q9BY84 665 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 NDE1Q9NXR1 346 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 GTSE1Q9NYZ3 720 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 PPM1HQ9ULR3 514 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 SCAMP3O14828 347 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 ADRA1BP35368 520 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 CHRNA4P43681 627 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 ZBTB17Q13105 803 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 PKDCCQ504Y2 493 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 PDPK2PQ6A1A2 396 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 ZNF410Q86VK4 478 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 PABPC5Q96DU9 382 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 FTHL17Q9BXU8 183 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 KCNK4Q9NYG8 393 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 FAM159BA6NKW6 160 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 PLIN3O60664 434 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 DHRS4L1P0CG22 281 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 SETSIPP0DME0 302 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 MPSTP25325 297 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 NOS2P35228 1153 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 SERPINB9P50453 376 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 NUDT2P50583 147 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 NME5P56597 212 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 OCRLQ01968 901 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 KLC1Q07866 573 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 ASPHQ12797 758 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 MPP3Q13368 585 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 ZRSR2Q15696 482 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 FBXO48Q5FWF7 155 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 ANO7Q6IWH7 933 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 KCNMB4Q86W47 210 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 CHSY1Q86X52 802 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 KCTD4Q8WVF5 259 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 TMA16Q96EY4 203 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 CATSPER2Q96P56 530 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 TMEM209Q96SK2 561 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 FSD1LQ9BXM9 530 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 PRG3Q9Y2Y8 225 aaPredicted RBP13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 PPME1Q9Y570 386 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 LTBP3Q9NS15 1303 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 NEMP2A6NFY4 417 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 GOLGA8CPA6NN73 597 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 C9IYK1 514 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 GLRA3O75311 464 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 SKIP12755 728 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 PGAM1P18669 254 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 MX2P20592 715 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 PTPN3P26045 913 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 CRHR1P34998 444 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 ACADSBP45954 432 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 PSEN2P49810 448 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 GJA9P57773 515 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 SLC34A1Q06495 639 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 PPM1LQ5SGD2 360 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 UNC93AQ86WB7 457 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 TMPRSS6Q8IU80 811 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 SLC41A1Q8IVJ1 513 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 TTC39CQ8N584 583 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 B3GALT6Q96L58 329 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 VRTNQ9H8Y1 702 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 CRTAC1Q9NQ79 661 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 MIOSQ9NXC5 875 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 FLRT1Q9NZU1 646 aa13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 RUVBL2Q9Y230 463 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-209ENST00000548825 CCDC160A6NGH7 325 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 TMEM233B4DJY2 109 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 I6L893 689 aaPredicted RBP13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 LRIG2O94898 1065 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 FDFT1P37268 417 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 GP5P40197 560 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 ARL1P40616 181 aaPredicted RBP13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 PTPN9P43378 593 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 NR2C2P49116 596 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 COPAP53621 1224 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 SLC18A1P54219 525 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 MPP1Q00013 466 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 TAF1CQ15572 869 aaPredicted RBP13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 TRIP10Q15642 601 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 KYAT1Q16773 422 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 WASHC2DQ5SRD0 308 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 MIB1Q86YT6 1006 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 LRRC52Q8N7C0 313 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 PAF1Q8N7H5 531 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 FAM156AQ8NDB6 213 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 C3orf58Q8NDZ4 430 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 ARNTL2Q8WYA1 636 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 EMID1Q96A84 441 aaPredicted RBP13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 SPON1Q9HCB6 807 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 ABI2Q9NYB9 513 aaPredicted RBP13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 MGAMO43451 1857 aa13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 TRIP12Q14669 1992 aaPredicted RBP13.96□□□□□ -0.17
PRPF40B-209ENST00000548825 C17orf102A2RUQ5 167 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 SIN3BO75182 1162 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 C2P06681 752 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 GRIK1P39086 918 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms