RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 CXorf57Q6NSI4 855 aaKnown RBP11.91□□□□□ -0.5
YBX3-213ENST00000542641 C1orf228Q6PIY5 440 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 TMCO3Q6UWJ1 677 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 TPRG1Q6ZUI0 275 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 ANKS1BQ7Z6G8 1248 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 SETD3Q86TU7 594 aaPredicted RBP11.91□□□□□ -0.5
YBX3-213ENST00000542641 ZSCAN30Q86W11 494 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 RFX6Q8HWS3 928 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 WFDC5Q8TCV5 224 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.91□□□□□ -0.5
YBX3-213ENST00000542641 FAF2Q96CS3 445 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 MSANTD3Q96H12 275 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 WDR24Q96S15 920 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 PSMB7Q99436 277 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 P2RY13Q9BPV8 354 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 ARHGEF3Q9NR81 526 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 ABCB8Q9NUT2 735 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 NDFIP2Q9NV92 336 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 KIAA1522Q9P206 1035 aaPredicted RBP11.91□□□□□ -0.5
YBX3-213ENST00000542641 ZNF212Q9UDV6 495 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 GGA2Q9UJY4 613 aa11.91□□□□□ -0.5
YBX3-213ENST00000542641 hCG_1818297A0A087WSY0 165 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 ILVBLA1L0T0 632 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 TBC1D3BA6NDS4 549 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 MAN2B1O00754 1011 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 APOL1O14791 398 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 DCLK1O15075 740 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 RAMP2O60895 175 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 ATP1A1P05023 1023 aaKnown RBP11.9□□□□□ -0.5
YBX3-213ENST00000542641 VCANP13611 3396 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 ZFXP17010 805 aaPredicted RBP11.9□□□□□ -0.5
YBX3-213ENST00000542641 HLA-FP30511 346 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 CD70P32970 193 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 GRIA2P42262 883 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 ETF1P62495 437 aaKnown RBP11.9□□□□□ -0.5
YBX3-213ENST00000542641 ZXDAP98168 799 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 PRKCQQ04759 706 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 KDSRQ06136 332 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 LMAN2Q12907 356 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 SLC12A1Q13621 1099 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 TFDP2Q14188 446 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 PPP2R5EQ16537 467 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 TAZQ16635 292 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 DCAF12L1Q5VU92 463 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 RNF219Q5W0B1 726 aaPredicted RBP11.9□□□□□ -0.5
YBX3-213ENST00000542641 AADACL2Q6P093 401 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 TXNDC11Q6PKC3 985 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 ZNF852Q6ZMS4 543 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 NUDT18Q6ZVK8 323 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 LZTR1Q8N653 840 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 PQLC3Q8N755 202 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 OR52K2Q8NGK3 314 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 FAM3CQ92520 227 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 SHDQ96IW2 340 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 HEMGNQ9BXL5 484 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 OSBPL8Q9BZF1 889 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 MUC3BQ9H195 1237 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 CARD9Q9H257 536 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 PRDM16Q9HAZ2 1276 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 FBRSL1Q9HCM7 1045 aaKnown RBP11.9□□□□□ -0.5
YBX3-213ENST00000542641 ETNK2Q9NVF9 386 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 SLC27A6Q9Y2P4 619 aa11.9□□□□□ -0.5
YBX3-213ENST00000542641 A0A0D9SEW6 157 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 CTAGE9A4FU28 777 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 KRBA1A5PL33 1030 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 DCXO43602 365 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 CST8O60676 142 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 KAT7O95251 611 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 APODP05090 189 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 PABPC1P11940 636 aaKnown RBP11.89□□□□□ -0.51
YBX3-213ENST00000542641 CD72P21854 359 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 MZF1P28698 734 aaPredicted RBP11.89□□□□□ -0.51
YBX3-213ENST00000542641 CXCR5P32302 372 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 SERPINB6P35237 376 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 CSKP41240 450 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 NUMBP49757 651 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 NDST2P52849 883 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 DYNLT1P63172 113 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 GNA12Q03113 381 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 MESP2Q0VG99 397 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 GRSF1Q12849 480 aaKnown RBP eCLIP11.89□□□□□ -0.51
YBX3-213ENST00000542641 DSG2Q14126 1118 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 POLD3Q15054 466 aaPredicted RBP11.89□□□□□ -0.51
YBX3-213ENST00000542641 PON2Q15165 354 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 GEN1Q17RS7 908 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 TMEM196Q5HYL7 178 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 SEL1L2Q5TEA6 688 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 NCBP2-AS2Q69YL0 99 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 SLC9A4Q6AI14 798 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 ZNF783Q6ZMS7 281 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 NYAP1Q6ZVC0 841 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 SUGP1Q8IWZ8 645 aaKnown RBP11.89□□□□□ -0.51
YBX3-213ENST00000542641 AHI1Q8N157 1196 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 SIX5Q8N196 739 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 UMODL1-AS1Q8N2C9 162 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 PHTF2Q8N3S3 785 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 NPWQ8N729 165 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.89□□□□□ -0.51
YBX3-213ENST00000542641 TERB1Q8NA31 727 aa11.89□□□□□ -0.51
YBX3-213ENST00000542641 EDAQ92838 391 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms