RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 OXCT2Q9BYC2 517 aaPredicted RBP15.14■□□□□ 0.01
DDX55-209ENST00000542286 ARHGAP39Q9C0H5 1083 aa15.14■□□□□ 0.01
DDX55-209ENST00000542286 SIK2Q9H0K1 926 aa15.14■□□□□ 0.01
DDX55-209ENST00000542286 TMLHEQ9NVH6 421 aa15.14■□□□□ 0.01
DDX55-209ENST00000542286 GSRP00390 522 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 ITGB1P05556 798 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 TSHRP16473 764 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 SAT1P21673 171 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 WARSP23381 471 aaKnown RBP15.13■□□□□ 0.01
DDX55-209ENST00000542286 BDNFP23560 247 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 ADRA1BP35368 520 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 SNX16P57768 344 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 PACS1Q6VY07 963 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 ATP2A3Q93084 1043 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 UBE2OQ9C0C9 1292 aaKnown RBP15.13■□□□□ 0.01
DDX55-209ENST00000542286 SDR42E2A6NKP2 422 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 ZFXP17010 805 aaPredicted RBP15.13■□□□□ 0.01
DDX55-209ENST00000542286 OCRLQ01968 901 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 DPYSQ14117 519 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 TIGD5Q53EQ6 642 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 VWA5B1Q5TIE3 1220 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 LIMS2Q7Z4I7 341 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 FAM105AQ9NUU6 356 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 ARL5CA6NH57 179 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 MEI4A8MW99 385 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 H3BRJ5 948 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 TRDMT1O14717 391 aaKnown RBP15.13■□□□□ 0.01
DDX55-209ENST00000542286 CHRNA1P02708 482 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 PTPN3P26045 913 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 PNPLA4P41247 253 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 DAOAP59103 153 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 EML3Q32P44 896 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 TEX44Q53QW1 395 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 FASTKD1Q53R41 847 aaKnown RBP15.13■□□□□ 0.01
DDX55-209ENST00000542286 RSPH3Q86UC2 560 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 RASSF3Q86WH2 238 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 PLD6Q8N2A8 252 aaKnown RBP15.13■□□□□ 0.01
DDX55-209ENST00000542286 DNAAF3Q8N9W5 541 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 ZNF669Q96BR6 464 aaPredicted RBP15.13■□□□□ 0.01
DDX55-209ENST00000542286 PTCD3Q96EY7 689 aaKnown RBP15.13■□□□□ 0.01
DDX55-209ENST00000542286 GBP5Q96PP8 586 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 TLE6Q9H808 572 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 XAB2Q9HCS7 855 aaKnown RBP15.13■□□□□ 0.01
DDX55-209ENST00000542286 G3BP2Q9UN86 482 aaKnown RBP15.13■□□□□ 0.01
DDX55-209ENST00000542286 SLC45A1Q9Y2W3 748 aa15.13■□□□□ 0.01
DDX55-209ENST00000542286 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.13■□□□□ 0.01
DDX55-209ENST00000542286 MAGEA13PA6NCF6 341 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 DCLK1O15075 740 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 MGEA5O60502 916 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 KRT36O76013 467 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 GSTT1P30711 240 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 CD68P34810 354 aaPredicted RBP15.12■□□□□ 0.01
DDX55-209ENST00000542286 TPI1P60174 286 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 IRF9Q00978 393 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 PDE1BQ01064 536 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 USP4Q13107 963 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 AGMOQ6ZNB7 445 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 OTOP3Q7RTS5 596 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 DTX3LQ8TDB6 740 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 WDR60Q8WVS4 1066 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 GATA6Q92908 595 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 NT5C3BQ969T7 300 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 TKTL2Q9H0I9 626 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 TMEM216Q9P0N5 145 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 ZNF180Q9UJW8 692 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 GABRDO14764 452 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 BPGMP07738 259 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 OR4Q2P0C623 313 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 CPT1AP50416 773 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 PEX6Q13608 980 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 TOP6BLQ8N6T0 577 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 PPP1R14CQ8TAE6 165 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 RILPQ96NA2 401 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 CHRAC1Q9NRG0 131 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 TAS2R1Q9NYW7 299 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 STAP1Q9ULZ2 295 aa15.12■□□□□ 0.01
DDX55-209ENST00000542286 MSI1O43347 362 aaKnown RBP15.11■□□□□ 0.01
DDX55-209ENST00000542286 XPOTO43592 962 aaKnown RBP15.11■□□□□ 0.01
DDX55-209ENST00000542286 PRKCGP05129 697 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 ITGA2BP08514 1039 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 CD1EP15812 388 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 CD52P31358 61 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 CCNFP41002 786 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 NIPAL4Q0D2K0 466 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 HSP90AA5PQ58FG0 334 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 SDHAF4Q5VUM1 108 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 FAM219BQ5XKK7 198 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 LRRC8BQ6P9F7 803 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 LRRC74BQ6ZQY2 392 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 C10orf107Q8IVU9 208 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 SPATA22Q8NHS9 363 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 MYLPFQ96A32 169 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 ZNF419Q96HQ0 510 aaPredicted RBP15.11■□□□□ 0.01
DDX55-209ENST00000542286 PPP1R36Q96LQ0 422 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 ZIC5Q96T25 663 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 RTP3Q9BQQ7 232 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 DMAP1Q9NPF5 467 aaPredicted RBP15.11■□□□□ 0.01
DDX55-209ENST00000542286 SIRPGQ9P1W8 387 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 GYG2O15488 501 aa15.11■□□□□ 0.01
DDX55-209ENST00000542286 TBX10O75333 385 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms