RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 VNN1O95497 513 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 C4BPAP04003 597 aaKnown RBP18.1■□□□□ 0.49
PVT1-220ENST00000524165 SLC5A2P31639 672 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 ASPAP45381 313 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 CLDN10P78369 228 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 INCA1Q0VD86 236 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 IGFBP7Q16270 282 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 CDKN3Q16667 212 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 PIK3R6Q5UE93 754 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 MFN1Q8IWA4 741 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 ZSCAN1Q8NBB4 408 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 WDR48Q8TAF3 677 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 ZNF507Q8TCN5 953 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 TAF4BQ92750 862 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 PTPRN2Q92932 1015 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 TWNKQ96RR1 684 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 NT5C1AQ9BXI3 368 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 PCDHGA4Q9Y5G9 962 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 CPED1A4D0V7 1026 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 CLIC2O15247 247 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 IRAK2O43187 625 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 LIPCP11150 499 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 CASRP41180 1078 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 CASP4P49662 377 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 HNRNPKP61978 463 aaKnown RBP eCLIP18.09■□□□□ 0.498e-7■■■□□ 14.8
PVT1-220ENST00000524165 SRSF6Q13247 344 aaKnown RBP18.09■□□□□ 0.49
PVT1-220ENST00000524165 MORC3Q14149 939 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 TGIF1Q15583 401 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 POM121L1PQ3SYA9 428 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 RAB41Q5JT25 222 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 GUSBP11Q6P575 273 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 EFL1Q7Z2Z2 1120 aaKnown RBP18.09■□□□□ 0.49
PVT1-220ENST00000524165 LIN37Q96GY3 246 aaPredicted RBP18.09■□□□□ 0.49
PVT1-220ENST00000524165 UBXN6Q9BZV1 441 aa18.09■□□□□ 0.49
PVT1-220ENST00000524165 LRRK1Q38SD2 2015 aa18.08■□□□□ 0.49
PVT1-220ENST00000524165 PLD2O14939 933 aa18.08■□□□□ 0.48
PVT1-220ENST00000524165 RPN1P04843 607 aaKnown RBP18.08■□□□□ 0.48
PVT1-220ENST00000524165 TXLNAP40222 546 aa18.08■□□□□ 0.48
PVT1-220ENST00000524165 PDX1P52945 283 aa18.08■□□□□ 0.48
PVT1-220ENST00000524165 EIF3IQ13347 325 aaKnown RBP18.08■□□□□ 0.48
PVT1-220ENST00000524165 CLCA4Q14CN2 919 aa18.08■□□□□ 0.48
PVT1-220ENST00000524165 SKIDA1Q1XH10 827 aa18.08■□□□□ 0.48
PVT1-220ENST00000524165 EPM2AIP1Q7L775 607 aaPredicted RBP18.08■□□□□ 0.48
PVT1-220ENST00000524165 PTRH1Q86Y79 214 aaKnown RBP18.08■□□□□ 0.48
PVT1-220ENST00000524165 PLEKHO2Q8TD55 490 aa18.08■□□□□ 0.48
PVT1-220ENST00000524165 FUCA2Q9BTY2 467 aa18.08■□□□□ 0.48
PVT1-220ENST00000524165 CALN1Q9BXU9 219 aa18.08■□□□□ 0.48
PVT1-220ENST00000524165 SEPT10Q9P0V9 454 aa18.08■□□□□ 0.48
PVT1-220ENST00000524165 CSNK1G3Q9Y6M4 447 aa18.08■□□□□ 0.48
PVT1-220ENST00000524165 ZFC3H1O60293 1989 aaKnown RBP18.08■□□□□ 0.48
PVT1-220ENST00000524165 C2CD3Q4AC94 2353 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 LRRIQ3A6PVS8 624 aaPredicted RBP18.07■□□□□ 0.48
PVT1-220ENST00000524165 H3BQV1 296 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 NEBLO76041 1014 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 CTSOP43234 321 aaPredicted RBP18.07■□□□□ 0.48
PVT1-220ENST00000524165 ECT2LQ008S8 904 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 PPP1R26Q5T8A7 1209 aaPredicted RBP18.07■□□□□ 0.48
PVT1-220ENST00000524165 PM20D1Q6GTS8 502 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 RFWD3Q6PCD5 774 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 CCDC73Q6ZRK6 1079 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 OR13H1Q8NG92 308 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 PARD3BQ8TEW8 1205 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 SPAG5Q96R06 1193 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 DNAI2Q9GZS0 605 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 PREBQ9HCU5 417 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 SFMBT1Q9UHJ3 866 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 SLCO3A1Q9UIG8 710 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 SALL4Q9UJQ4 1053 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 ANAPC2Q9UJX6 822 aa18.07■□□□□ 0.48
PVT1-220ENST00000524165 ASS1P00966 412 aaKnown RBP18.06■□□□□ 0.48
PVT1-220ENST00000524165 METAP1P53582 386 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 FAM133BQ5BKY9 247 aaKnown RBP18.06■□□□□ 0.48
PVT1-220ENST00000524165 PITRM1Q5JRX3 1037 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 MANEAQ5SRI9 462 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 AGBL4Q5VU57 503 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 FAM46CQ5VWP2 391 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 HIST2H2BCQ6DN03 193 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 DSG4Q86SJ6 1040 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 DCP2Q8IU60 420 aaKnown RBP18.06■□□□□ 0.48
PVT1-220ENST00000524165 C12orf56Q8IXR9 622 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 FAM174AQ8TBP5 190 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 RNF139Q8WU17 664 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 CAAP1Q9H8G2 361 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 DNAJC28Q9NX36 388 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 STIM2Q9P246 746 aa18.06■□□□□ 0.48
PVT1-220ENST00000524165 CGNQ9P2M7 1197 aaKnown RBP18.06■□□□□ 0.48
PVT1-220ENST00000524165 PLEKHB1Q9UF11 243 aaPredicted RBP18.06■□□□□ 0.48
PVT1-220ENST00000524165 LRBAP50851 2863 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 SLC31A1O15431 190 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 KRT38O76015 456 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 MOCS3O95396 460 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 ZBED1O96006 694 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 SLC6A4P31645 630 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 STAT6P42226 847 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 SLC11A2P49281 568 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 NCAPHQ15003 741 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 RNF219Q5W0B1 726 aaPredicted RBP18.05■□□□□ 0.48
PVT1-220ENST00000524165 BHLHA9Q7RTU4 235 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 PIGZQ86VD9 579 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 JAMLQ86YT9 394 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms