RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 TANC1Q9C0D5 1861 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 E9PAM4 449 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 H7C4K7 107 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 LPXNO60711 386 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 RTN3O95197 1032 aaPredicted RBP26.48■■□□□ 1.83
COL13A1-214ENST00000522165 SLC2A3P11169 496 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 ADRA1DP25100 572 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 TUBP50607 506 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 NEK3P51956 506 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 ATN1P54259 1190 aaPredicted RBP26.48■■□□□ 1.83
COL13A1-214ENST00000522165 MLLT6P55198 1093 aaPredicted RBP26.48■■□□□ 1.83
COL13A1-214ENST00000522165 CGB2Q6NT52 195 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 RNF19BQ6ZMZ0 732 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 ARHGAP36Q6ZRI8 547 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 C14orf80Q86SX3 495 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 FBXO32Q969P5 355 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 SLC17A7Q9P2U7 560 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 ARHGAP42A6NI28 874 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 KRT38O76015 456 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 SMARCB1Q12824 385 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 CRYMQ14894 314 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 SEPT7Q16181 437 aaKnown RBP26.48■■□□□ 1.83
COL13A1-214ENST00000522165 TAS1R1Q7RTX1 841 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 SPATA21Q7Z572 469 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 UNC5BQ8IZJ1 945 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 ATPAF2Q8N5M1 289 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 BCL7CQ8WUZ0 217 aaPredicted RBP26.48■■□□□ 1.83
COL13A1-214ENST00000522165 CCT6BQ92526 530 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 SPATA17Q96L03 361 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 RNF208Q9H0X6 261 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 CASS4Q9NQ75 786 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 CLIC5Q9NZA1 410 aa26.48■■□□□ 1.83
COL13A1-214ENST00000522165 TBX4P57082 545 aa26.47■■□□□ 1.83
COL13A1-214ENST00000522165 MGAT5BQ3V5L5 792 aa26.47■■□□□ 1.83
COL13A1-214ENST00000522165 PIK3R6Q5UE93 754 aa26.47■■□□□ 1.83
COL13A1-214ENST00000522165 ANKS3Q6ZW76 656 aa26.47■■□□□ 1.83
COL13A1-214ENST00000522165 ANKRD33Q7Z3H0 272 aa26.47■■□□□ 1.83
COL13A1-214ENST00000522165 SPOCK2Q92563 424 aa26.47■■□□□ 1.83
COL13A1-214ENST00000522165 MTBPQ96DY7 904 aa26.47■■□□□ 1.83
COL13A1-214ENST00000522165 TTPALQ9BTX7 342 aa26.47■■□□□ 1.83
COL13A1-214ENST00000522165 PITPNM3Q9BZ71 974 aa26.47■■□□□ 1.83
COL13A1-214ENST00000522165 SLC39A8Q9C0K1 460 aa26.47■■□□□ 1.83
COL13A1-214ENST00000522165 C12orf65Q9H3J6 166 aaKnown RBP26.47■■□□□ 1.83
COL13A1-214ENST00000522165 FNDC1Q4ZHG4 1894 aaPredicted RBP26.47■■□□□ 1.83
COL13A1-214ENST00000522165 CCT8L1PA6NM43 557 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 USP12O75317 370 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 HAPLN1P10915 354 aaPredicted RBP26.46■■□□□ 1.83
COL13A1-214ENST00000522165 CCL5P13501 91 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 SERPINB9P50453 376 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 NIPAL4Q0D2K0 466 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 DNAJC3Q13217 504 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 LRRC43Q8N309 656 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 CNTD1Q8N815 330 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 RTL3Q8N8U3 475 aaKnown RBP26.46■■□□□ 1.83
COL13A1-214ENST00000522165 LRRC8CQ8TDW0 803 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 GRAMD1AQ96CP6 724 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 SEPT5Q99719 369 aaPredicted RBP26.46■■□□□ 1.83
COL13A1-214ENST00000522165 NDFIP2Q9NV92 336 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 EFEMP1Q12805 493 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 AFMIDQ63HM1 303 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 FAM47EQ6ZV65 393 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 MARK2Q7KZI7 788 aaKnown RBP26.46■■□□□ 1.83
COL13A1-214ENST00000522165 OXCT2Q9BYC2 517 aaPredicted RBP26.46■■□□□ 1.83
COL13A1-214ENST00000522165 PPP1R12CQ9BZL4 782 aa26.46■■□□□ 1.83
COL13A1-214ENST00000522165 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.46■■□□□ 1.83
COL13A1-214ENST00000522165 HMX2A2RU54 273 aa26.45■■□□□ 1.83
COL13A1-214ENST00000522165 PARNO95453 639 aaKnown RBP26.45■■□□□ 1.83
COL13A1-214ENST00000522165 ALADP13716 330 aa26.45■■□□□ 1.83
COL13A1-214ENST00000522165 PSEN1P49768 467 aa26.45■■□□□ 1.83
COL13A1-214ENST00000522165 TAF10Q12962 218 aa26.45■■□□□ 1.83
COL13A1-214ENST00000522165 BMPR2Q13873 1038 aa26.45■■□□□ 1.83
COL13A1-214ENST00000522165 ZNF276Q8N554 614 aa26.45■■□□□ 1.83
COL13A1-214ENST00000522165 KDM4CQ9H3R0 1056 aa26.45■■□□□ 1.83
COL13A1-214ENST00000522165 TLR8Q9NR97 1041 aaKnown RBP26.45■■□□□ 1.83
COL13A1-214ENST00000522165 MPP6Q9NZW5 540 aa26.45■■□□□ 1.83
COL13A1-214ENST00000522165 VANGL2Q9ULK5 521 aa26.45■■□□□ 1.83
COL13A1-214ENST00000522165 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.45■■□□□ 1.82
COL13A1-214ENST00000522165 WASH4PA8MWX3 477 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 CACNG3O60359 315 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 MAFKO60675 156 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 RFPL1O75677 317 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 POLBP06746 335 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 CCNB1P14635 433 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 SLC39A5Q6ZMH5 540 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 KLHDC8BQ8IXV7 354 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 C10orf67Q8IYJ2 551 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 USP33Q8TEY7 942 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 C2orf15Q8WU43 125 aaKnown RBP26.45■■□□□ 1.82
COL13A1-214ENST00000522165 ZNF75CPQ92670 426 aaPredicted RBP26.45■■□□□ 1.82
COL13A1-214ENST00000522165 VPS11Q9H270 941 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 OLA1Q9NTK5 396 aaKnown RBP26.45■■□□□ 1.82
COL13A1-214ENST00000522165 COMMD8Q9NX08 183 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 BFARQ9NZS9 450 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 PRKAG3Q9UGI9 489 aa26.45■■□□□ 1.82
COL13A1-214ENST00000522165 TBX18O95935 607 aa26.44■■□□□ 1.82
COL13A1-214ENST00000522165 DHRS4L1P0CG22 281 aa26.44■■□□□ 1.82
COL13A1-214ENST00000522165 CCNFP41002 786 aa26.44■■□□□ 1.82
COL13A1-214ENST00000522165 ETV4P43268 484 aa26.44■■□□□ 1.82
COL13A1-214ENST00000522165 PRPSAP1Q14558 356 aa26.44■■□□□ 1.82
COL13A1-214ENST00000522165 RASIP1Q5U651 963 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms