RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 DONSONQ9NYP3 566 aa15.37■□□□□ 0.05
NUP54-213ENST00000513352 VPS28Q9UK41 221 aa15.37■□□□□ 0.05
NUP54-213ENST00000513352 NUP205Q92621 2012 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 KANSL1LA0AUZ9 987 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 TMEM221A6NGB7 291 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 M0R296 226 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 RAMP2O60895 175 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 EGFP01133 1207 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 CISD3P0C7P0 127 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 POLR2EP19388 210 aaKnown RBP15.36■□□□□ 0.05
NUP54-213ENST00000513352 DRD1P21728 446 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 MZF1P28698 734 aaPredicted RBP15.36■□□□□ 0.05
NUP54-213ENST00000513352 STARD6P59095 220 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 DYNLT1P63172 113 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 ZNF211Q13398 564 aaPredicted RBP15.36■□□□□ 0.05
NUP54-213ENST00000513352 FUT11Q495W5 492 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 ANKRD20A8PQ5CZ79 823 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 TMEM196Q5HYL7 178 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 PITRM1Q5JRX3 1037 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 ARTNQ5T4W7 220 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 MEI1Q5TIA1 1274 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 RNF43Q68DV7 783 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 IL31Q6EBC2 164 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 FSTL4Q6MZW2 842 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 MFSD7Q6UXD7 560 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 SPOCD1Q6ZMY3 1216 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 SFTPA1Q8IWL2 248 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 OR52K2Q8NGK3 314 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 EXD1Q8NHP7 514 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 TSC1Q92574 1164 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 ALG3Q92685 438 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 CELF6Q96J87 481 aaKnown RBP15.36■□□□□ 0.05
NUP54-213ENST00000513352 COL25A1Q9BXS0 654 aaPredicted RBP15.36■□□□□ 0.05
NUP54-213ENST00000513352 LTB4R2Q9NPC1 389 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 NDFIP2Q9NV92 336 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 FBXO10Q9UK96 956 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 ZKSCAN5Q9Y2L8 839 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 SLC27A6Q9Y2P4 619 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 MFHAS1Q9Y4C4 1052 aa15.36■□□□□ 0.05
NUP54-213ENST00000513352 ILVBLA1L0T0 632 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 C3orf70A6NLC5 250 aaPredicted RBP15.35■□□□□ 0.05
NUP54-213ENST00000513352 FAM170BA6NMN3 283 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 WASH4PA8MWX3 477 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 ENC1O14682 589 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 DDX3YO15523 660 aaKnown RBP15.35■□□□□ 0.05
NUP54-213ENST00000513352 TARSP26639 723 aaKnown RBP15.35■□□□□ 0.05
NUP54-213ENST00000513352 GNG11P61952 73 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 GNA12Q03113 381 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 LRRC32Q14392 662 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 POLD3Q15054 466 aaPredicted RBP15.35■□□□□ 0.05
NUP54-213ENST00000513352 TFDP3Q5H9I0 405 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 SEL1L2Q5TEA6 688 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 MBLAC2Q68D91 279 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 APCDD1Q8J025 514 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 PHTF2Q8N3S3 785 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 NETO2Q8NC67 525 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 OR7D4Q8NG98 312 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 FAM71BQ8TC56 605 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 UCMAQ8WVF2 138 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 HES6Q96HZ4 224 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 RNF157Q96PX1 679 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 PSMB7Q99436 277 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 RETREG1Q9H6L5 497 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 ATP13A1Q9HD20 1204 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 RBM12Q9NTZ6 932 aaKnown RBP15.35■□□□□ 0.05
NUP54-213ENST00000513352 ETNK2Q9NVF9 386 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 TBC1D30Q9Y2I9 924 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 TECTAO75443 2155 aa15.35■□□□□ 0.05
NUP54-213ENST00000513352 A0A0D9SEW6 157 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 SHISA7A6NL88 538 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 PRRT4C9JH25 899 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 DFFAO00273 331 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 KCNK3O14649 394 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 APOL1O14791 398 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 DCLK1O15075 740 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 PDGFBP01127 241 aaPredicted RBP15.34■□□□□ 0.05
NUP54-213ENST00000513352 KRT10P13645 584 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 IL4RP24394 825 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 SERPINB6P35237 376 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 ACVRL1P37023 503 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 ETFBP38117 255 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 CDKN2BP42772 138 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 PEX5P50542 639 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 SLC12A1Q13621 1099 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 DMC1Q14565 340 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 PLEKHG6Q3KR16 790 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 CCDC181Q5TID7 509 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 AADACL2Q6P093 401 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 ZNF783Q6ZMS7 281 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.34■□□□□ 0.05
NUP54-213ENST00000513352 PCDH19Q8TAB3 1148 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 SORCS1Q8WY21 1168 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 HEMGNQ9BXL5 484 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 MAGEH1Q9H213 219 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 ZNF212Q9UDV6 495 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 HPCAL4Q9UM19 191 aa15.34■□□□□ 0.05
NUP54-213ENST00000513352 MTF2Q9Y483 593 aaPredicted RBP15.34■□□□□ 0.05
NUP54-213ENST00000513352 MYO18AQ92614 2054 aaKnown RBP15.34■□□□□ 0.05
NUP54-213ENST00000513352 hCG_1818297A0A087WSY0 165 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 ARHGAP42A6NI28 874 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms