RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 MUC3BQ9H195 1237 aa16.43■□□□□ 0.22
SSBP1-214ENST00000498107 KCNH6Q9H252 994 aa16.43■□□□□ 0.22
SSBP1-214ENST00000498107 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSBP1-214ENST00000498107 GPATCH2LQ9NWQ4 482 aa16.43■□□□□ 0.22
SSBP1-214ENST00000498107 THAP10Q9P2Z0 257 aaPredicted RBP16.43■□□□□ 0.22
SSBP1-214ENST00000498107 KMT2EQ8IZD2 1858 aa16.43■□□□□ 0.22
SSBP1-214ENST00000498107 ZNF318Q5VUA4 2279 aa16.43■□□□□ 0.22
SSBP1-214ENST00000498107 WASH4PA8MWX3 477 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 GALR2O43603 387 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-214ENST00000498107 SPOPO43791 374 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 PAPSS2O95340 614 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-214ENST00000498107 KLF8O95600 359 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-214ENST00000498107 CCDC175P0C221 793 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 NTSR1P30989 418 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 NNMTP40261 264 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 CSKP41240 450 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 ST8SIA6P61647 398 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 GAS6Q14393 721 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 KRT81Q14533 505 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 PDK2Q15119 407 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 FUT11Q495W5 492 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 ODF2Q5BJF6 829 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 PITRM1Q5JRX3 1037 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 ZFYVE27Q5T4F4 411 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 LRRC38Q5VT99 294 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 RNF219Q5W0B1 726 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-214ENST00000498107 RFX8Q6ZV50 586 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 NLRP14Q86W24 1093 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 ALLCQ8N6M5 410 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 RTL3Q8N8U3 475 aaKnown RBP16.42■□□□□ 0.22
SSBP1-214ENST00000498107 IL17RCQ8NAC3 791 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 KCTD15Q96SI1 283 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-214ENST00000498107 FEM1AQ9BSK4 669 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 C2orf49Q9BVC5 232 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-214ENST00000498107 MAGEB5Q9BZ81 275 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 RCOR3Q9P2K3 495 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-214ENST00000498107 VPS28Q9UK41 221 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 MMP17Q9ULZ9 603 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 SLC8A2Q9UPR5 921 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 ADGRG1Q9Y653 693 aa16.42■□□□□ 0.22
SSBP1-214ENST00000498107 RCCD1A6NED2 376 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 ZBTB24O43167 697 aaPredicted RBP16.41■□□□□ 0.22
SSBP1-214ENST00000498107 KRT86O43790 486 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 BUB1BO60566 1050 aaPredicted RBP16.41■□□□□ 0.22
SSBP1-214ENST00000498107 SRPRAP08240 638 aaKnown RBP16.41■□□□□ 0.22
SSBP1-214ENST00000498107 TCF4P15884 667 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 CDH6P55285 790 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 CCZ1BP86790 482 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 CCZ1P86791 482 aaPredicted RBP16.41■□□□□ 0.22
SSBP1-214ENST00000498107 CA9Q16790 459 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 EGFLAMQ63HQ2 1017 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 TMEM215Q68D42 235 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 DAAM2Q86T65 1068 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 SFTPA1Q8IWL2 248 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 RHOT1Q8IXI2 618 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 RNF10Q8N5U6 811 aaKnown RBP16.41■□□□□ 0.22
SSBP1-214ENST00000498107 KDM1BQ8NB78 822 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 TXNDC5Q8NBS9 432 aaKnown RBP16.41■□□□□ 0.22
SSBP1-214ENST00000498107 KCTD6Q8NC69 237 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 TPCN2Q8NHX9 752 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 LACRTQ9GZZ8 138 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 IRF2BPLQ9H1B7 796 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 MAGEH1Q9H213 219 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 ZNF212Q9UDV6 495 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 FBXO4Q9UKT5 387 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 TFR2Q9UP52 801 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 NEU3Q9UQ49 428 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 ALG6Q9Y672 507 aa16.41■□□□□ 0.22
SSBP1-214ENST00000498107 PSTPIP1O43586 416 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 BUB1O43683 1085 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 RAMP2O60895 175 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 GOT1P17174 413 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 COMTP21964 271 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 MZF1P28698 734 aaPredicted RBP16.4■□□□□ 0.22
SSBP1-214ENST00000498107 GJC1P36383 396 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 DGKEP52429 567 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 YBEYP58557 167 aaPredicted RBP16.4■□□□□ 0.22
SSBP1-214ENST00000498107 ECT2LQ008S8 904 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 GNA12Q03113 381 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 STARD3Q14849 445 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 FNDC3BQ53EP0 1204 aaKnown RBP16.4■□□□□ 0.22
SSBP1-214ENST00000498107 ARTNQ5T4W7 220 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 SERPINA13PQ6UXR4 307 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 APCDD1Q8J025 514 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 SYCE1Q8N0S2 351 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 CCDC33Q8N5R6 958 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 CAMKK1Q8N5S9 505 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 LZTR1Q8N653 840 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 DCAF4L2Q8NA75 395 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 PCDH18Q9HCL0 1135 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 POLMQ9NP87 494 aaPredicted RBP16.4■□□□□ 0.22
SSBP1-214ENST00000498107 PRMT8Q9NR22 394 aaPredicted RBP16.4■□□□□ 0.22
SSBP1-214ENST00000498107 DDX56Q9NY93 547 aaKnown RBP16.4■□□□□ 0.22
SSBP1-214ENST00000498107 CWC15Q9P013 229 aaKnown RBP16.4■□□□□ 0.22
SSBP1-214ENST00000498107 DNAI1Q9UI46 699 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 SLC25A13Q9UJS0 675 aa16.4■□□□□ 0.22
SSBP1-214ENST00000498107 INTS6Q9UL03 887 aaKnown RBP16.4■□□□□ 0.22
SSBP1-214ENST00000498107 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.4■□□□□ 0.22
SSBP1-214ENST00000498107 CACNA1IQ9P0X4 2223 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms